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Released as 20151122 ('Bataclan')

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Ole Tange 2015-11-22 19:57:42 +01:00
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9 changed files with 75 additions and 21 deletions
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33
NEWS
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@ -1,3 +1,36 @@
20151122
* GNU Parallel packaged for CERN CentOS: http://linuxsoft.cern.ch/cern/centos/7/cern/x86_64/repoview/parallel.html
* GNU Parallel was cited in: The Outer Solar System Origins Survey: I. Design and First-Quarter Discoveries http://arxiv.org/pdf/1511.02895.pdf
* GNU Parallel was cited in: Contrasting genetic architectures of schizophrenia and other complex diseases using fast variance-components analysis http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3431.html
* GNU Parallel was cited in: Named-Entity Chunking for Norwegian Text using Support Vector Machines http://ojs.bibsys.no/index.php/NIK/article/viewFile/248/211
* GNU Parallel was cited in: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004381#pcbi.1004381.ref072
* GNU Parallel was cited in: A Detailed Characterization of Errors in Logic Circuits due to Single-Event Transients http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=7302348&url=http%3A%2F%2Fieeexplore.ieee.org%2Fxpls%2Fabs_all.jsp%3Farnumber%3D7302348
* GNU Parallel was cited in: Exploiting Multiple Levels of Parallelism in Sparse Matrix-Matrix Multiplication http://arxiv.org/pdf/1510.00844.pdf
* GNU Parallel was cited in: Arabic Speaker Emotion Classification Using Rhythm Metrics and Neural Networks http://www.eurasip.org/Proceedings/Eusipco/Eusipco2015/papers/1570104855.pdf
* GNU Parallel was cited in: Stride Search: a general algorithm for storm detection in high resolution climate data http://www.geosci-model-dev-discuss.net/8/7727/2015/gmdd-8-7727-2015.pdf
* GNU Parallel was cited in: Decomposing Digital Paintings into Layers via RGB-space Geometry http://arxiv.org/pdf/1509.03335.pdf
* GNU Parallel was cited in: Structure and evolutionary history of a large family of NLR proteins in the zebrafish http://www.biorxiv.org/content/biorxiv/early/2015/09/18/027151.full.pdf
* GNU Parallel was cited in: Evolution of movement strategies under competitive interactions http://digital.csic.es/bitstream/10261/115973/1/evolution_movement_strategies_Kiziridis.pdf
* Automating large numbers of tasks https://rcc.uchicago.edu/docs/tutorials/kicp-tutorials/running-jobs.html
* Max out your IOPs with GNU Parallel http://blog.bitratchet.com/2015/11/11/max-out-your-iops-with-gnu-parallel/
* Bug fixes and man page updates.
20151022 20151022
* --plus makes it possible to use {##} as a shorthand for * --plus makes it possible to use {##} as a shorthand for

12
README
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@ -40,9 +40,9 @@ document.
Full installation of GNU Parallel is as simple as: Full installation of GNU Parallel is as simple as:
wget http://ftpmirror.gnu.org/parallel/parallel-20151022.tar.bz2 wget http://ftpmirror.gnu.org/parallel/parallel-20151122.tar.bz2
bzip2 -dc parallel-20151022.tar.bz2 | tar xvf - bzip2 -dc parallel-20151122.tar.bz2 | tar xvf -
cd parallel-20151022 cd parallel-20151122
./configure && make && sudo make install ./configure && make && sudo make install
@ -51,9 +51,9 @@ Full installation of GNU Parallel is as simple as:
If you are not root you can add ~/bin to your path and install in If you are not root you can add ~/bin to your path and install in
~/bin and ~/share: ~/bin and ~/share:
wget http://ftpmirror.gnu.org/parallel/parallel-20151022.tar.bz2 wget http://ftpmirror.gnu.org/parallel/parallel-20151122.tar.bz2
bzip2 -dc parallel-20151022.tar.bz2 | tar xvf - bzip2 -dc parallel-20151122.tar.bz2 | tar xvf -
cd parallel-20151022 cd parallel-20151122
./configure --prefix=$HOME && make && make install ./configure --prefix=$HOME && make && make install
Or if your system lacks 'make' you can simply copy src/parallel Or if your system lacks 'make' you can simply copy src/parallel

20
configure vendored
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@ -1,6 +1,6 @@
#! /bin/sh #! /bin/sh
# Guess values for system-dependent variables and create Makefiles. # Guess values for system-dependent variables and create Makefiles.
# Generated by GNU Autoconf 2.69 for parallel 20151022. # Generated by GNU Autoconf 2.69 for parallel 20151122.
# #
# Report bugs to <bug-parallel@gnu.org>. # Report bugs to <bug-parallel@gnu.org>.
# #
@ -579,8 +579,8 @@ MAKEFLAGS=
# Identity of this package. # Identity of this package.
PACKAGE_NAME='parallel' PACKAGE_NAME='parallel'
PACKAGE_TARNAME='parallel' PACKAGE_TARNAME='parallel'
PACKAGE_VERSION='20151022' PACKAGE_VERSION='20151122'
PACKAGE_STRING='parallel 20151022' PACKAGE_STRING='parallel 20151122'
PACKAGE_BUGREPORT='bug-parallel@gnu.org' PACKAGE_BUGREPORT='bug-parallel@gnu.org'
PACKAGE_URL='' PACKAGE_URL=''
@ -1203,7 +1203,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing. # Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh. # This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF cat <<_ACEOF
\`configure' configures parallel 20151022 to adapt to many kinds of systems. \`configure' configures parallel 20151122 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]... Usage: $0 [OPTION]... [VAR=VALUE]...
@ -1269,7 +1269,7 @@ fi
if test -n "$ac_init_help"; then if test -n "$ac_init_help"; then
case $ac_init_help in case $ac_init_help in
short | recursive ) echo "Configuration of parallel 20151022:";; short | recursive ) echo "Configuration of parallel 20151122:";;
esac esac
cat <<\_ACEOF cat <<\_ACEOF
@ -1345,7 +1345,7 @@ fi
test -n "$ac_init_help" && exit $ac_status test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then if $ac_init_version; then
cat <<\_ACEOF cat <<\_ACEOF
parallel configure 20151022 parallel configure 20151122
generated by GNU Autoconf 2.69 generated by GNU Autoconf 2.69
Copyright (C) 2012 Free Software Foundation, Inc. Copyright (C) 2012 Free Software Foundation, Inc.
@ -1362,7 +1362,7 @@ cat >config.log <<_ACEOF
This file contains any messages produced by compilers while This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake. running configure, to aid debugging if configure makes a mistake.
It was created by parallel $as_me 20151022, which was It was created by parallel $as_me 20151122, which was
generated by GNU Autoconf 2.69. Invocation command line was generated by GNU Autoconf 2.69. Invocation command line was
$ $0 $@ $ $0 $@
@ -2225,7 +2225,7 @@ fi
# Define the identity of the package. # Define the identity of the package.
PACKAGE='parallel' PACKAGE='parallel'
VERSION='20151022' VERSION='20151122'
cat >>confdefs.h <<_ACEOF cat >>confdefs.h <<_ACEOF
@ -2867,7 +2867,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
# report actual input values of CONFIG_FILES etc. instead of their # report actual input values of CONFIG_FILES etc. instead of their
# values after options handling. # values after options handling.
ac_log=" ac_log="
This file was extended by parallel $as_me 20151022, which was This file was extended by parallel $as_me 20151122, which was
generated by GNU Autoconf 2.69. Invocation command line was generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES = $CONFIG_FILES CONFIG_FILES = $CONFIG_FILES
@ -2929,7 +2929,7 @@ _ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`" ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
ac_cs_version="\\ ac_cs_version="\\
parallel config.status 20151022 parallel config.status 20151122
configured by $0, generated by GNU Autoconf 2.69, configured by $0, generated by GNU Autoconf 2.69,
with options \\"\$ac_cs_config\\" with options \\"\$ac_cs_config\\"

2
configure.ac
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@ -1,4 +1,4 @@
AC_INIT([parallel], [20151022], [bug-parallel@gnu.org]) AC_INIT([parallel], [20151122], [bug-parallel@gnu.org])
AM_INIT_AUTOMAKE([-Wall -Werror foreign]) AM_INIT_AUTOMAKE([-Wall -Werror foreign])
AC_CONFIG_HEADERS([config.h]) AC_CONFIG_HEADERS([config.h])
AC_CONFIG_FILES([ AC_CONFIG_FILES([

21
doc/release_new_version
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@ -238,12 +238,33 @@ http://www.researchgate.net/profile/Christoph_Junghans/publication/276178326_TAD
* GNU Parallel packaged for CERN CentOS: http://linuxsoft.cern.ch/cern/centos/7/cern/x86_64/repoview/parallel.html * GNU Parallel packaged for CERN CentOS: http://linuxsoft.cern.ch/cern/centos/7/cern/x86_64/repoview/parallel.html
* GNU Parallel was cited in: The Outer Solar System Origins Survey: I. Design and First-Quarter Discoveries http://arxiv.org/pdf/1511.02895.pdf
* GNU Parallel was cited in: Contrasting genetic architectures of schizophrenia and other complex diseases using fast variance-components analysis http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3431.html
* GNU Parallel was cited in: Named-Entity Chunking for Norwegian Text using Support Vector Machines http://ojs.bibsys.no/index.php/NIK/article/viewFile/248/211
* GNU Parallel was cited in: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004381#pcbi.1004381.ref072
* GNU Parallel was cited in: A Detailed Characterization of Errors in Logic Circuits due to Single-Event Transients http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=7302348&url=http%3A%2F%2Fieeexplore.ieee.org%2Fxpls%2Fabs_all.jsp%3Farnumber%3D7302348
* GNU Parallel was cited in: Exploiting Multiple Levels of Parallelism in Sparse Matrix-Matrix Multiplication http://arxiv.org/pdf/1510.00844.pdf
* GNU Parallel was cited in: Arabic Speaker Emotion Classification Using Rhythm Metrics and Neural Networks http://www.eurasip.org/Proceedings/Eusipco/Eusipco2015/papers/1570104855.pdf
* GNU Parallel was cited in: Stride Search: a general algorithm for storm detection in high resolution climate data http://www.geosci-model-dev-discuss.net/8/7727/2015/gmdd-8-7727-2015.pdf
* GNU Parallel was cited in: Decomposing Digital Paintings into Layers via RGB-space Geometry http://arxiv.org/pdf/1509.03335.pdf
* GNU Parallel was cited in: Structure and evolutionary history of a large family of NLR proteins in the zebrafish http://www.biorxiv.org/content/biorxiv/early/2015/09/18/027151.full.pdf
* Automating large numbers of tasks https://rcc.uchicago.edu/docs/tutorials/kicp-tutorials/running-jobs.html * Automating large numbers of tasks https://rcc.uchicago.edu/docs/tutorials/kicp-tutorials/running-jobs.html
* Max out your IOPs with GNU Parallel http://blog.bitratchet.com/2015/11/11/max-out-your-iops-with-gnu-parallel/ * Max out your IOPs with GNU Parallel http://blog.bitratchet.com/2015/11/11/max-out-your-iops-with-gnu-parallel/
* GNU Parallel was cited in: Evolution of movement strategies under competitive interactions http://digital.csic.es/bitstream/10261/115973/1/evolution_movement_strategies_Kiziridis.pdf * GNU Parallel was cited in: Evolution of movement strategies under competitive interactions http://digital.csic.es/bitstream/10261/115973/1/evolution_movement_strategies_Kiziridis.pdf
* Bug fixes and man page updates. * Bug fixes and man page updates.
GNU Parallel - For people who live life in the parallel lane. GNU Parallel - For people who live life in the parallel lane.

2
packager/obs/home:tange/parallel/parallel.spec
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@ -1,6 +1,6 @@
Summary: Shell tool for executing jobs in parallel Summary: Shell tool for executing jobs in parallel
Name: parallel Name: parallel
Version: 20151022 Version: 20151122
Release: 1 Release: 1
License: GPL License: GPL
Group: Productivity/File utilities Group: Productivity/File utilities

2
src/niceload
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@ -24,7 +24,7 @@
use strict; use strict;
use Getopt::Long; use Getopt::Long;
$Global::progname="niceload"; $Global::progname="niceload";
$Global::version = 20151022; $Global::version = 20151122;
Getopt::Long::Configure("bundling","require_order"); Getopt::Long::Configure("bundling","require_order");
get_options_from_array(\@ARGV) || die_usage(); get_options_from_array(\@ARGV) || die_usage();
if($opt::version) { if($opt::version) {

2
src/parallel
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@ -1118,7 +1118,7 @@ sub check_invalid_option_combinations {
sub init_globals { sub init_globals {
# Defaults: # Defaults:
$Global::version = 20151023; $Global::version = 20151122;
$Global::progname = 'parallel'; $Global::progname = 'parallel';
$Global::infinity = 2**31; $Global::infinity = 2**31;
$Global::debug = 0; $Global::debug = 0;

2
src/sql
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@ -566,7 +566,7 @@ $Global::Initfile && unlink $Global::Initfile;
exit ($err); exit ($err);
sub parse_options { sub parse_options {
$Global::version = 20151022; $Global::version = 20151122;
$Global::progname = 'sql'; $Global::progname = 'sql';
# This must be done first as this may exec myself # This must be done first as this may exec myself