mirror of
https://git.savannah.gnu.org/git/parallel.git
synced 2024-10-18 04:49:40 +00:00
parallel: Speedup of --lb: Don't look for \r if \n is found.
This commit is contained in:
Ole Tange
parent
01228bfa41
commit
16e6fb9a65
5
NEWS
5
NEWS
|
|
@ -2994,7 +2994,7 @@ New in this release:
|
|||
|
||||
20140922
|
||||
|
||||
* If the file give as --sshloginfile is changed it will be re-read
|
||||
* If the file given as --sshloginfile is changed it will be re-read
|
||||
when a job finishes though at most once per second. This makes it
|
||||
possible to add and remove hosts while running.
|
||||
|
||||
|
|
@ -3689,7 +3689,8 @@ New in this release:
|
|||
pretty cool!
|
||||
|
||||
* GNU Parallel was used (unfortunately with improper citation) in:
|
||||
Understanding the Impact of E-Commerce Software on the Adoption of Structured Data on the Web
|
||||
Understanding the Impact of E-Commerce Software on the Adoption of
|
||||
Structured Data on the Web
|
||||
http://link.springer.com/chapter/10.1007/978-3-642-38366-3_9#page-1
|
||||
|
||||
* GNU Parallel was used (unfortunately with improper citation) in:
|
||||
|
|
|
|||
|
|
@ -1,4 +1,4 @@
|
|||
AC_INIT([parallel], [20211222], [bug-parallel@gnu.org])
|
||||
AC_INIT([parallel],[20211222],[bug-parallel@gnu.org])
|
||||
AM_INIT_AUTOMAKE([-Wall -Werror foreign])
|
||||
AC_CONFIG_HEADERS([config.h])
|
||||
AC_CONFIG_FILES([
|
||||
|
|
@ -7,8 +7,7 @@ AC_CONFIG_FILES([
|
|||
])
|
||||
|
||||
AC_ARG_ENABLE(documentation,
|
||||
AC_HELP_STRING([--disable-documentation],
|
||||
[Omit building and installing the documentation. (default=no)]),,
|
||||
AS_HELP_STRING([--disable-documentation],[Omit building and installing the documentation. (default=no)]),,
|
||||
[enable_documentation=yes])
|
||||
AM_CONDITIONAL([DOCUMENTATION], [test x$enable_documentation = xyes])
|
||||
AC_PROG_LN_S
|
||||
|
|
|
|||
|
|
@ -24,8 +24,8 @@ if ! $TMP/bin/parallel-20140722 --version; then
|
|||
mkdir -p $TMP/ftp
|
||||
(
|
||||
cd $TMP/ftp
|
||||
# wget -c ftp://ftp.gnu.org/old-gnu/parallel/p*
|
||||
wget -c ftp://ftp.uni-kl.de/pub/gnu/parallel/p*
|
||||
wget -c ftp://ftp.gnu.org/old-gnu/parallel/p*
|
||||
wget -c ftp://mirrors.dotsrc.org/gnu/parallel/p*
|
||||
parallel 'gpg --auto-key-locate keyserver --keyserver-options auto-key-retrieve {}' ::: *.sig
|
||||
parallel --plus 'tar xvf {.} && cd {...} && ./configure --prefix '$TMP'/ftp/{.}-bin && make && make install' ::: *sig
|
||||
perl -i -pe 's/qw\(keys/(keys/' parallel*/src/parallel
|
||||
|
|
@ -45,7 +45,8 @@ measure() {
|
|||
CORES=$3
|
||||
VERSION=$4
|
||||
MHZ=1700
|
||||
|
||||
echo Running $OUTER test with $INNER jobs each on $CORES cores
|
||||
|
||||
# Force cpuspeed at 1.7GHz - seems to give tighter results
|
||||
#forever 'parallel sudo cpufreq-set -g performance -u '$MHZ'MHz -d '$MHZ'MHz -c{} ::: {0..3};sleep 10' &
|
||||
|
||||
|
|
|
|||
|
|
@ -53,9 +53,9 @@ to treat it as software that you have no license to use.
|
|||
|
||||
== Do automated scripts break if the notice is not silenced? ==
|
||||
|
||||
No. Not a single time has that happened. This is due to the notice
|
||||
only being printed, if the output is to the screen - not if the output
|
||||
is to a file or a pipe.
|
||||
No. Not a single time has that been demonstrated to happen. This is
|
||||
due to the notice only being printed, if the output is to the screen -
|
||||
not if the output is to a file or a pipe.
|
||||
|
||||
|
||||
== How do I silence the citation notice? ==
|
||||
|
|
@ -86,6 +86,8 @@ The notice is only relevant if you write scientific articles.
|
|||
These links say: Yes, you should cite software, and if the author
|
||||
suggests a way of citing, use that.
|
||||
|
||||
* https://www.force11.org/software-citation-principles (refers to many others)
|
||||
* https://www.software.ac.uk/blog/2016-09-30-oh-research-software-how-shalt-i-cite-thee
|
||||
* https://blog.apastyle.org/apastyle/2015/01/how-to-cite-software-in-apa-style.html
|
||||
* https://libguides.mit.edu/c.php?g=551454&p=3900280
|
||||
* https://www.software.ac.uk/how-cite-software
|
||||
|
|
@ -94,17 +96,20 @@ suggests a way of citing, use that.
|
|||
* https://journals.aas.org/policy-statement-on-software/
|
||||
* https://guides.lib.monash.edu/c.php?g=219786&p=1454293
|
||||
* https://www.maxqda.com/blogpost/how-to-cite-maxqda
|
||||
* https://the-turing-way.netlify.app/communication/citable/citable-cite.html
|
||||
* https://docs.github.com/en/github/creating-cloning-and-archiving-repositories/creating-a-repository-on-github/about-citation-files
|
||||
|
||||
The CITATION.cff file format was designed to make it easy to cite
|
||||
software.
|
||||
|
||||
If you feel the benefit from using GNU Parallel is too small to
|
||||
warrant a citation, then prove that by simply using another tool. If
|
||||
you replace your use of GNU Parallel with another tool, you obviously
|
||||
do not have to cite GNU Parallel. If it is too much work replacing the
|
||||
use of GNU Parallel, then it is a good indication that the benefit is
|
||||
big enough to warrant a citation.
|
||||
use of GNU Parallel, then it is a good indication that the
|
||||
contribution to the research is big enough to warrant a citation.
|
||||
|
||||
The citation is also needed for reproducibility. Let us assume a bug
|
||||
in GNU Parallel skews the results. People replicating the research
|
||||
needs to have the information, so they can replicate the (possibly
|
||||
wrong) results.
|
||||
|
||||
|
||||
== Do other software tools show how to cite? ==
|
||||
|
|
@ -126,6 +131,9 @@ refer to peer-reviewed articles - others do not:
|
|||
* http://www.fon.hum.uva.nl/paul/praat.html
|
||||
* https://github.com/UnixJunkie/PAR/blob/master/README
|
||||
|
||||
The CITATION.cff file format was designed to make it easy to cite
|
||||
software, and
|
||||
|
||||
|
||||
== I do not like the notice. Can I fork GNU Parallel and remove it? ==
|
||||
|
||||
|
|
@ -185,9 +193,27 @@ been public domain.
|
|||
Yes. Find a way to finance future development of GNU Parallel. If you
|
||||
pay me a normal salary, I will be happy to remove the citation notice.
|
||||
|
||||
You can also pay to use a specific version, which you will then get
|
||||
without the citation notice.
|
||||
|
||||
The citation notice is about (indirect) funding - nothing else.
|
||||
|
||||
|
||||
== Free software should be funded, but not this way ==
|
||||
|
||||
OK. But then please take resposibility and do the funding. Show that
|
||||
it is indeed possible to fund GNU Parallel in a different way by
|
||||
actually doing it.
|
||||
|
||||
Talk is cheap, and action speaks louder than words. Instead of just
|
||||
telling others what to do, prove that you are serious and actually
|
||||
*do* the work.
|
||||
|
||||
I will be happy to get a "funding manager" and remove the citation
|
||||
notice, if that means I can stop worrying about rent, mortgages, bills
|
||||
and retirement.
|
||||
|
||||
|
||||
== I do not want to cite ==
|
||||
|
||||
If you do not want to cite, then you should use another tool.
|
||||
|
|
|
|||
16
doc/haikus
16
doc/haikus
|
|
@ -4,6 +4,19 @@
|
|||
|
||||
Quote of the month:
|
||||
|
||||
If I could only keep 5 GNU utils, parallel would make it to the list
|
||||
:)
|
||||
-- 5heikki@reddit
|
||||
|
||||
|
||||
Gnu Parallel: installed in every computer i have access to.
|
||||
-- raffaele messuti @atomotic@twitter
|
||||
|
||||
gnu parallel is a good program
|
||||
-- Pwn A. Day @pwnaday@twitter
|
||||
|
||||
Deus salve o gnu parallel
|
||||
-- marcos @guv_Tuv@twitter
|
||||
|
||||
@a201
|
||||
4
|
||||
|
|
@ -158,7 +171,7 @@ https://negfeedback.blogspot.com/2020/05/indispensable-command-line-tools.html
|
|||
me optimise so many of my tasks and analyses.
|
||||
-- Parice Brandies @PariceBrandies@twitter
|
||||
|
||||
We use gnu parallel now - and happier for it.
|
||||
We use gnu parallel now - and happier for it.
|
||||
-- Ben Davies @benjamindavies@twitter
|
||||
|
||||
GNU Parallel makes my life so much easier.
|
||||
|
|
@ -214,7 +227,6 @@ We use gnu parallel now - and happier for it.
|
|||
and pool concurrency.
|
||||
-- Nick Ursa @nickursa@twitter
|
||||
|
||||
|
||||
I wish more command line software had example pages as robust as GNU Parallel
|
||||
-- Lucidbeaming @lucidbeaming
|
||||
|
||||
|
|
|
|||
|
|
@ -254,7 +254,7 @@ from:tange@gnu.org
|
|||
to:parallel@gnu.org, bug-parallel@gnu.org
|
||||
stable-bcc: Jesse Alama <jessealama@fastmail.fm>
|
||||
|
||||
Subject: GNU Parallel 20220122 ('James Webb/Tutu/Pillar of Shame<<>>') released <<[stable]>>
|
||||
Subject: GNU Parallel 20220122 ('Kazakhstan/James Webb/Tutu/Pillar of Shame<<>>') released <<[stable]>>
|
||||
|
||||
GNU Parallel 20220122 ('<<>>') <<[stable]>> has been released. It is available for download at: lbry://@GnuParallel:4
|
||||
|
||||
|
|
|
|||
93
src/parallel
93
src/parallel
|
|
@ -334,8 +334,8 @@ sub parcat_script() {
|
|||
for $infh (@ready) {
|
||||
# There is only one key, namely the output file descriptor
|
||||
for my $outfd (keys %{$buffer{$infh}}) {
|
||||
# TODO test if 65536 is optimal (2^17 is used elsewhere)
|
||||
$rv = sysread($infh, $buf, 65536);
|
||||
# TODO test if 60800 is optimal (2^17 is used elsewhere)
|
||||
$rv = sysread($infh, $buf, 60800);
|
||||
if (!$rv) {
|
||||
if($! == EAGAIN) {
|
||||
# Would block: Nothing read
|
||||
|
|
@ -829,7 +829,30 @@ sub cat_partial($@) {
|
|||
my @start_len = map {
|
||||
if(++$i % 2) { $start = $_; } else { $_-$start }
|
||||
} @start_end;
|
||||
# This can read 7 GB/s using a single core
|
||||
# The optimal block size differs
|
||||
# It has been measured on:
|
||||
# AMD 6376: n*4k-1; small n
|
||||
# AMD Neo N36L: 44k-200k
|
||||
# Intel i7-3632QM: 55k-
|
||||
# ARM Cortex A53: 4k-28k
|
||||
# Intel i5-2410M: 36k-46k
|
||||
#
|
||||
# I choose 2^15-1 = 32767
|
||||
# q{
|
||||
# expseq() {
|
||||
# perl -E '
|
||||
# $last = pop @ARGV;
|
||||
# $first = shift || 1;
|
||||
# $inc = shift || 1.03;
|
||||
# for($i=$first; $i<=$last;$i*=$inc) { say int $i }
|
||||
# ' "$@"
|
||||
# }
|
||||
#
|
||||
# seq 111111111 > big;
|
||||
# f() { ppar --test $1 -a big --pipepart --block -1 'md5sum > /dev/null'; }
|
||||
# export -f f;
|
||||
# expseq 1000 1.001 300000 | shuf | parallel -j1 --jl jl-md5sum f;
|
||||
# };
|
||||
my $script = spacefree
|
||||
(0,
|
||||
q{
|
||||
|
|
@ -837,7 +860,7 @@ sub cat_partial($@) {
|
|||
sysseek(STDIN,shift,0) || die;
|
||||
$left = shift;
|
||||
while($read =
|
||||
sysread(STDIN,$buf, $left > 131072 ? 131072 : $left)){
|
||||
sysread(STDIN,$buf, $left > 32767 ? 32767 : $left)){
|
||||
$left -= $read;
|
||||
syswrite(STDOUT,$buf);
|
||||
}
|
||||
|
|
@ -1635,7 +1658,7 @@ sub options_hash() {
|
|||
# https://www.gnu.org/software/parallel/parallel_design.html#Citation-notice
|
||||
# https://git.savannah.gnu.org/cgit/parallel.git/tree/doc/citation-notice-faq.txt
|
||||
# You accept to be put in a public hall of shame by removing
|
||||
# the lines.
|
||||
# these lines.
|
||||
"bibtex|citation" => \$opt::citation,
|
||||
"wc|willcite|will-cite|nn|nonotice|no-notice" => \$opt::willcite,
|
||||
# Termination and retries
|
||||
|
|
@ -1670,7 +1693,7 @@ sub options_hash() {
|
|||
"exit|x" => \$opt::x,
|
||||
# Semaphore
|
||||
"semaphore" => \$opt::semaphore,
|
||||
"semaphoretimeout|st=i" => \$opt::semaphoretimeout,
|
||||
"semaphoretimeout|st=s" => \$opt::semaphoretimeout,
|
||||
"semaphorename|id=s" => \$opt::semaphorename,
|
||||
"fg" => \$opt::fg,
|
||||
"bg" => \$opt::bg,
|
||||
|
|
@ -1705,6 +1728,8 @@ sub options_hash() {
|
|||
"embed" => \$opt::embed,
|
||||
"filter=s" => \@opt::filter,
|
||||
"parset=s" => \$opt::parset,
|
||||
# Parameter for testing optimal values
|
||||
"test=s" => \$opt::test,
|
||||
);
|
||||
}
|
||||
|
||||
|
|
@ -2561,10 +2586,12 @@ sub parse_semaphore() {
|
|||
::wait_and_exit(255);
|
||||
}
|
||||
}
|
||||
@opt::a = ("/dev/null");
|
||||
# Append a dummy empty argument
|
||||
# \0 => nothing (not the empty string)
|
||||
push(@Global::unget_argv, [Arg->new("\0noarg")]);
|
||||
$Semaphore::timeout = $opt::semaphoretimeout || 0;
|
||||
$Semaphore::timeout = int(multiply_time_units($opt::semaphoretimeout))
|
||||
|| 0;
|
||||
if(defined $opt::semaphorename) {
|
||||
$Semaphore::name = $opt::semaphorename;
|
||||
} else {
|
||||
|
|
@ -4907,8 +4934,8 @@ sub reaper() {
|
|||
if($Global::delayauto or $Global::sshdelayauto) {
|
||||
if($job->exitstatus()) {
|
||||
# Job failed: Increase delay (if $opt::(ssh)delay set)
|
||||
$opt::delay &&= $opt::delay * 2;
|
||||
$opt::sshdelay &&= $opt::sshdelay * 2;
|
||||
$opt::delay &&= $opt::delay * 1.3;
|
||||
$opt::sshdelay &&= $opt::sshdelay * 1.3;
|
||||
} else {
|
||||
# Job succeeded: Decrease delay (if $opt::(ssh)delay set)
|
||||
$opt::delay &&= $opt::delay * 0.9;
|
||||
|
|
@ -5094,7 +5121,7 @@ sub usage() {
|
|||
# https://www.gnu.org/software/parallel/parallel_design.html#Citation-notice
|
||||
# https://git.savannah.gnu.org/cgit/parallel.git/tree/doc/citation-notice-faq.txt
|
||||
# You accept to be put in a public hall of shame by removing
|
||||
# the lines.
|
||||
# these lines.
|
||||
"This helps funding further development; AND IT WON'T COST YOU A CENT.",
|
||||
"If you pay 10000 EUR you should feel free to use GNU Parallel without citing.",
|
||||
"",
|
||||
|
|
@ -5127,7 +5154,7 @@ sub citation_notice() {
|
|||
# https://www.gnu.org/software/parallel/parallel_design.html#Citation-notice and
|
||||
# https://git.savannah.gnu.org/cgit/parallel.git/tree/doc/citation-notice-faq.txt
|
||||
# You accept to be put in a public hall of shame by
|
||||
# removing the lines.
|
||||
# removing these lines.
|
||||
"This helps funding further development; AND IT WON'T COST YOU A CENT.",
|
||||
"If you pay 10000 EUR you should feel free to use GNU Parallel without citing.",
|
||||
"",
|
||||
|
|
@ -5265,7 +5292,7 @@ sub citation() {
|
|||
# https://www.gnu.org/software/parallel/parallel_design.html#Citation-notice and
|
||||
# https://git.savannah.gnu.org/cgit/parallel.git/tree/doc/citation-notice-faq.txt
|
||||
# You accept to be put in a public hall of shame by removing
|
||||
# the lines.
|
||||
# these lines.
|
||||
"This helps funding further development; AND IT WON'T COST YOU A CENT.",
|
||||
"If you pay 10000 EUR you should feel free to use GNU Parallel without citing.",
|
||||
"",
|
||||
|
|
@ -5839,7 +5866,7 @@ sub which(@) {
|
|||
# ash bash csh dash fdsh fish fizsh ksh ksh93 mksh pdksh
|
||||
# posh rbash rc rush rzsh sash sh static-sh tcsh yash zsh
|
||||
|
||||
my @shells = (qw(ash bash bsd-csh csh dash fdsh fish fizsh ksh
|
||||
my @shells = (qw(ash bash bsd-csh csh dash fdsh fish fizsh ksh
|
||||
ksh93 lksh mksh pdksh posh rbash rc rush rzsh sash sh
|
||||
static-sh tcsh yash zsh -sh -csh -bash),
|
||||
'-sh (sh)' # sh on FreeBSD
|
||||
|
|
@ -8665,16 +8692,16 @@ sub empty_input_wrapper($) {
|
|||
# Returns:
|
||||
# $wrapped_command = the wrapped command
|
||||
my $command = shift;
|
||||
# The optimal block size differs
|
||||
# It has been measured on:
|
||||
# AMD 6376: 59000
|
||||
# <big ppar --pipe --block 100M --test $1 -j1 'cat >/dev/null';
|
||||
my $script =
|
||||
::spacefree(0,q{
|
||||
if(sysread(STDIN, $buf, 1)) {
|
||||
open($fh, "|-", @ARGV) || die;
|
||||
syswrite($fh, $buf);
|
||||
# Align up to 128k block
|
||||
if($read = sysread(STDIN, $buf, 131071)) {
|
||||
syswrite($fh, $buf);
|
||||
}
|
||||
while($read = sysread(STDIN, $buf, 131072)) {
|
||||
while($read = sysread(STDIN, $buf, 59000)) {
|
||||
syswrite($fh, $buf);
|
||||
}
|
||||
close $fh;
|
||||
|
|
@ -9098,6 +9125,11 @@ sub total_failed($) {
|
|||
# * cat > fifo
|
||||
# * waitpid to get the exit code from $command
|
||||
# * be less than 1000 chars long
|
||||
|
||||
# The optimal block size differs
|
||||
# It has been measured on:
|
||||
# AMD 6376: 4095
|
||||
# ppar -a big --pipepart --block -1 --test $1 --fifo 'cat {} >/dev/null';
|
||||
$script = "perl -e '".
|
||||
(::spacefree
|
||||
(0, q{
|
||||
|
|
@ -9108,7 +9140,7 @@ sub total_failed($) {
|
|||
$pid = fork || exec $s, "-c", $c;
|
||||
open($o,">",$f) || die $!;
|
||||
# cat > $PARALLEL_TMP
|
||||
while(sysread(STDIN,$buf,131072)){
|
||||
while(sysread(STDIN,$buf,4095)){
|
||||
syswrite $o, $buf;
|
||||
}
|
||||
close $o;
|
||||
|
|
@ -9207,7 +9239,7 @@ sub wrapped($) {
|
|||
# --pipepart: prepend:
|
||||
# < /tmp/foo perl -e 'while(@ARGV) {
|
||||
# sysseek(STDIN,shift,0) || die; $left = shift;
|
||||
# while($read = sysread(STDIN,$buf, ($left > 131072 ? 131072 : $left))){
|
||||
# while($read = sysread(STDIN,$buf, ($left > 60800 ? 60800 : $left))){
|
||||
# $left -= $read; syswrite(STDOUT,$buf);
|
||||
# }
|
||||
# }' 0 0 0 11 |
|
||||
|
|
@ -9646,7 +9678,7 @@ sub fill_templates($) {
|
|||
# Returns:
|
||||
# @templates - File names of replaced templates
|
||||
my $self = shift;
|
||||
|
||||
|
||||
if(%opt::template) {
|
||||
my @template_name =
|
||||
map { $self->{'commandline'}->replace_placeholders([$_],0,0) }
|
||||
|
|
@ -10663,11 +10695,21 @@ sub print_linebuffer($) {
|
|||
my ($buf,$i,$rv);
|
||||
# 1310720 gives 1.2 GB/s
|
||||
# 131072 gives 0.9 GB/s
|
||||
while($rv = sysread($in_fh, $buf,1310720)) {
|
||||
# The optimal block size differs
|
||||
# It has been measured on:
|
||||
# AMD 6376: 60800 (>70k is also reasonable)
|
||||
# Intel i7-3632QM: 52-59k, 170-175k
|
||||
# seq 64 | ppar --test $1 --lb 'yes {} `seq 1000`|head -c 10000000' >/dev/null
|
||||
while($rv = sysread($in_fh, $buf, 60800)) {
|
||||
$outputlength += $rv;
|
||||
# TODO --recend
|
||||
# Treat both \n and \r as line end
|
||||
$i = ::max((rindex($buf,"\n")+1), (rindex($buf,"\r")+1));
|
||||
# Only test for \r if there is no \n
|
||||
# Test:
|
||||
# perl -e '$a="x"x1000000;
|
||||
# $b="$a\r$a\n$a\r$a\n";
|
||||
# map { print $b,$_ } 1..10'
|
||||
$i = ((rindex($buf,"\n")+1) || (rindex($buf,"\r")+1));
|
||||
if($i) {
|
||||
# One or more complete lines were found
|
||||
if($opt::tag or defined $opt::tagstring) {
|
||||
|
|
@ -10839,7 +10881,8 @@ sub print_normal($) {
|
|||
}
|
||||
} else {
|
||||
# Most efficient way of copying data from $in_fh to $out_fh
|
||||
while(sysread($in_fh,$buf,131072)) {
|
||||
# Intel i7-3632QM: 25k-
|
||||
while(sysread($in_fh,$buf,32767)) {
|
||||
print $out_fh $buf;
|
||||
$outputlength += length $buf;
|
||||
if($Global::membuffer) {
|
||||
|
|
@ -10887,7 +10930,7 @@ sub print_results($) {
|
|||
}
|
||||
} else {
|
||||
# Most efficient way of copying data from $in_fh to $out_fh
|
||||
while(sysread($in_fh,$buf,131072)) {
|
||||
while(sysread($in_fh,$buf,60000)) {
|
||||
$outputlength += length $buf;
|
||||
push @{$self->{'output'}{$fdno}}, $buf;
|
||||
}
|
||||
|
|
|
|||
428
src/parallel.pod
428
src/parallel.pod
|
|
@ -128,10 +128,11 @@ B<Zsh, Fish, Ksh, and Pdksh functions and aliases>: Use B<env_parallel>.
|
|||
|
||||
=item B<{}>
|
||||
|
||||
Input line. This replacement string will be replaced by a full line
|
||||
read from the input source. The input source is normally stdin
|
||||
(standard input), but can also be given with B<-a>, B<:::>, or
|
||||
B<::::>.
|
||||
Input line.
|
||||
|
||||
This replacement string will be replaced by a full line read from the
|
||||
input source. The input source is normally stdin (standard input), but
|
||||
can also be given with B<-a>, B<:::>, or B<::::>.
|
||||
|
||||
The replacement string B<{}> can be changed with B<-I>.
|
||||
|
||||
|
|
@ -142,17 +143,21 @@ Replacement strings are normally quoted, so special characters are not
|
|||
parsed by the shell. The exception is if the command starts with a
|
||||
replacement string; then the string is not quoted.
|
||||
|
||||
See also: B<--plus> B<{.}> B<{/}> B<{//}> B<{/.}> B<{#}> B<{%}>
|
||||
B<{>I<n>B<}> B<{=>I<perl expression>B<=}>
|
||||
|
||||
|
||||
=item B<{.}>
|
||||
|
||||
Input line without extension. This replacement string will be replaced
|
||||
by the input with the extension removed. If the input line contains
|
||||
B<.> after the last B</>, the last B<.> until the end of the string
|
||||
will be removed and B<{.}> will be replaced with the
|
||||
remaining. E.g. I<foo.jpg> becomes I<foo>, I<subdir/foo.jpg> becomes
|
||||
I<subdir/foo>, I<sub.dir/foo.jpg> becomes I<sub.dir/foo>,
|
||||
I<sub.dir/bar> remains I<sub.dir/bar>. If the input line does not
|
||||
contain B<.> it will remain unchanged.
|
||||
Input line without extension.
|
||||
|
||||
This replacement string will be replaced by the input with the
|
||||
extension removed. If the input line contains B<.> after the last
|
||||
B</>, the last B<.> until the end of the string will be removed and
|
||||
B<{.}> will be replaced with the remaining. E.g. I<foo.jpg> becomes
|
||||
I<foo>, I<subdir/foo.jpg> becomes I<subdir/foo>, I<sub.dir/foo.jpg>
|
||||
becomes I<sub.dir/foo>, I<sub.dir/bar> remains I<sub.dir/bar>. If the
|
||||
input line does not contain B<.> it will remain unchanged.
|
||||
|
||||
The replacement string B<{.}> can be changed with B<--er>.
|
||||
|
||||
|
|
@ -161,8 +166,10 @@ To understand replacement strings see B<{}>.
|
|||
|
||||
=item B<{/}>
|
||||
|
||||
Basename of input line. This replacement string will be replaced by
|
||||
the input with the directory part removed.
|
||||
Basename of input line.
|
||||
|
||||
This replacement string will be replaced by the input with the
|
||||
directory part removed.
|
||||
|
||||
The replacement string B<{/}> can be changed with
|
||||
B<--basenamereplace>.
|
||||
|
|
@ -172,8 +179,10 @@ To understand replacement strings see B<{}>.
|
|||
|
||||
=item B<{//}>
|
||||
|
||||
Dirname of input line. This replacement string will be replaced by the
|
||||
dir of the input line. See B<dirname>(1).
|
||||
Dirname of input line.
|
||||
|
||||
This replacement string will be replaced by the dir of the input
|
||||
line. See B<dirname>(1).
|
||||
|
||||
The replacement string B<{//}> can be changed with
|
||||
B<--dirnamereplace>.
|
||||
|
|
@ -183,9 +192,11 @@ To understand replacement strings see B<{}>.
|
|||
|
||||
=item B<{/.}>
|
||||
|
||||
Basename of input line without extension. This replacement string will
|
||||
be replaced by the input with the directory and extension part
|
||||
removed. It is a combination of B<{/}> and B<{.}>.
|
||||
Basename of input line without extension.
|
||||
|
||||
This replacement string will be replaced by the input with the
|
||||
directory and extension part removed. It is a combination of B<{/}>
|
||||
and B<{.}>.
|
||||
|
||||
The replacement string B<{/.}> can be changed with
|
||||
B<--basenameextensionreplace>.
|
||||
|
|
@ -195,9 +206,10 @@ To understand replacement strings see B<{}>.
|
|||
|
||||
=item B<{#}>
|
||||
|
||||
Sequence number of the job to run. This replacement string will be
|
||||
replaced by the sequence number of the job being run. It contains the
|
||||
same number as $PARALLEL_SEQ.
|
||||
Sequence number of the job to run.
|
||||
|
||||
This replacement string will be replaced by the sequence number of the
|
||||
job being run. It contains the same number as $PARALLEL_SEQ.
|
||||
|
||||
The replacement string B<{#}> can be changed with B<--seqreplace>.
|
||||
|
||||
|
|
@ -206,10 +218,11 @@ To understand replacement strings see B<{}>.
|
|||
|
||||
=item B<{%}>
|
||||
|
||||
Job slot number. This replacement string will be replaced by the job's
|
||||
slot number between 1 and number of jobs to run in parallel. There
|
||||
will never be 2 jobs running at the same time with the same job slot
|
||||
number.
|
||||
Job slot number.
|
||||
|
||||
This replacement string will be replaced by the job's slot number
|
||||
between 1 and number of jobs to run in parallel. There will never be 2
|
||||
jobs running at the same time with the same job slot number.
|
||||
|
||||
The replacement string B<{%}> can be changed with B<--slotreplace>.
|
||||
|
||||
|
|
@ -242,14 +255,18 @@ To understand replacement strings see B<{}>.
|
|||
|
||||
=item B<{>I<n>B<}>
|
||||
|
||||
Argument from input source I<n> or the I<n>'th argument. This
|
||||
positional replacement string will be replaced by the input from input
|
||||
source I<n> (when used with B<-a> or B<::::>) or with the I<n>'th
|
||||
argument (when used with B<-N>). If I<n> is negative it refers to the
|
||||
I<n>'th last argument.
|
||||
Argument from input source I<n> or the I<n>'th argument.
|
||||
|
||||
This positional replacement string will be replaced by the input from
|
||||
input source I<n> (when used with B<-a> or B<::::>) or with the
|
||||
I<n>'th argument (when used with B<-N>). If I<n> is negative it refers
|
||||
to the I<n>'th last argument.
|
||||
|
||||
To understand replacement strings see B<{}>.
|
||||
|
||||
See also: B<{}> B<{>I<n>.B<}> B<{>I<n>/B<}> B<{>I<n>//B<}>
|
||||
B<{>I<n>/.B<}>
|
||||
|
||||
|
||||
=item B<{>I<n>.B<}>
|
||||
|
||||
|
|
@ -305,11 +322,12 @@ To understand positional replacement strings see B<{>I<n>B<}>.
|
|||
|
||||
=item B<{=>I<perl expression>B<=}>
|
||||
|
||||
Replace with calculated I<perl expression>. B<$_> will contain the
|
||||
same as B<{}>. After evaluating I<perl expression> B<$_> will be used
|
||||
as the value. It is recommended to only change $_ but you have full
|
||||
access to all of GNU B<parallel>'s internal functions and data
|
||||
structures.
|
||||
Replace with calculated I<perl expression>.
|
||||
|
||||
B<$_> will contain the same as B<{}>. After evaluating I<perl
|
||||
expression> B<$_> will be used as the value. It is recommended to only
|
||||
change $_ but you have full access to all of GNU B<parallel>'s
|
||||
internal functions and data structures.
|
||||
|
||||
The expression must give the same result if evaluated twice -
|
||||
otherwise the behaviour is undefined. E.g. this will not work as expected:
|
||||
|
|
@ -386,7 +404,7 @@ See also: B<--rpl> B<--parens>
|
|||
Positional equivalent to B<{=perl expression=}>. To understand
|
||||
positional replacement strings see B<{>I<n>B<}>.
|
||||
|
||||
See also: B<{=perl expression=}> B<{>I<n>B<}>.
|
||||
See also: B<{=perl expression=}> B<{>I<n>B<}>
|
||||
|
||||
|
||||
=item B<:::> I<arguments>
|
||||
|
|
@ -405,7 +423,7 @@ The following are equivalent:
|
|||
parallel ::: "gzip file1" "gzip file2"
|
||||
|
||||
To avoid treating B<:::> as special use B<--arg-sep> to set the
|
||||
argument separator to something else. See also B<--arg-sep>.
|
||||
argument separator to something else.
|
||||
|
||||
If multiple B<:::> are given, each group will be treated as an input
|
||||
source, and all combinations of input sources will be
|
||||
|
|
@ -427,6 +445,8 @@ B<:::> and B<::::> can be mixed. So these are equivalent:
|
|||
seq 4 5 | parallel echo {1} {2} {3} :::: <(seq 6 7) - \
|
||||
::: 1 2 3
|
||||
|
||||
See also: B<--arg-sep>
|
||||
|
||||
|
||||
=item B<:::+> I<arguments>
|
||||
|
||||
|
|
@ -446,7 +466,7 @@ Another way to write B<-a> I<argfile1> B<-a> I<argfile2> ...
|
|||
|
||||
B<:::> and B<::::> can be mixed.
|
||||
|
||||
See B<-a>, B<:::> and B<--link>.
|
||||
See also: B<-a> B<:::> B<--link>
|
||||
|
||||
|
||||
=item B<::::+> I<argfiles>
|
||||
|
|
@ -465,6 +485,10 @@ Use NUL as delimiter. Normally input lines will end in \n
|
|||
(newline). If they end in \0 (NUL), then use this option. It is useful
|
||||
for processing arguments that may contain \n (newline).
|
||||
|
||||
Shortcut for B<-d '\0'>.
|
||||
|
||||
See also: B<-d>
|
||||
|
||||
|
||||
=item B<--arg-file> I<input-file>
|
||||
|
||||
|
|
@ -481,7 +505,7 @@ contains B<a b c>. B<-a foo> B<-a bar> will result in the combinations
|
|||
(1,a) (1,b) (1,c) (2,a) (2,b) (2,c). This is useful for replacing
|
||||
nested for-loops.
|
||||
|
||||
See also: B<--link> and B<{>I<n>B<}>.
|
||||
See also: B<--link> B<{>I<n>B<}>
|
||||
|
||||
|
||||
=item B<--arg-file-sep> I<sep-str>
|
||||
|
|
@ -490,7 +514,7 @@ Use I<sep-str> instead of B<::::> as separator string between command
|
|||
and argument files. Useful if B<::::> is used for something else by the
|
||||
command.
|
||||
|
||||
See also: B<::::>.
|
||||
See also: B<::::>
|
||||
|
||||
|
||||
=item B<--arg-sep> I<sep-str>
|
||||
|
|
@ -502,7 +526,7 @@ Also useful if you command uses B<:::> but you still want to read
|
|||
arguments from stdin (standard input): Simply change B<--arg-sep> to a
|
||||
string that is not in the command line.
|
||||
|
||||
See also: B<:::>.
|
||||
See also: B<:::>
|
||||
|
||||
|
||||
=item B<--bar>
|
||||
|
|
@ -546,8 +570,12 @@ Use the replacement string I<replace-str> instead of B<{/.}> for basename of inp
|
|||
|
||||
Use I<binexpr> as binning key and bin input to the jobs.
|
||||
|
||||
I<binexpr> is [column number|column name] [perlexpression] e.g. 3,
|
||||
Address, 3 $_%=100, Address s/\D//g.
|
||||
I<binexpr> is [column number|column name] [perlexpression] e.g.:
|
||||
|
||||
3
|
||||
Address
|
||||
3 $_%=100
|
||||
Address s/\D//g
|
||||
|
||||
Each input line is split using B<--colsep>. The value of the column is
|
||||
put into $_, the perl expression is executed, the resulting value is
|
||||
|
|
@ -563,7 +591,9 @@ I<bincol> is small (<10), slower if it is big (>100).
|
|||
|
||||
B<--bin> requires B<--pipe> and a fixed numeric value for B<--jobs>.
|
||||
|
||||
See also: B<--shard>, B<--group-by>, B<--roundrobin>.
|
||||
See the section: SPREADING BLOCKS OF DATA.
|
||||
|
||||
See also: B<--group-by> B<--roundrobin> B<--shard>
|
||||
|
||||
|
||||
=item B<--bg>
|
||||
|
|
@ -572,10 +602,11 @@ Run command in background thus GNU B<parallel> will not wait for
|
|||
completion of the command before exiting. This is the default if
|
||||
B<--semaphore> is set.
|
||||
|
||||
See also: B<--fg>, B<man sem>.
|
||||
|
||||
Implies B<--semaphore>.
|
||||
|
||||
See also: B<--fg> B<man sem>
|
||||
|
||||
|
||||
=cut
|
||||
|
||||
# You accept to be added to a public hall of shame by
|
||||
|
|
@ -643,11 +674,8 @@ Time out for reading block when using B<--pipe>. If it takes longer
|
|||
than I<duration> to read a full block, use the partial block read so
|
||||
far.
|
||||
|
||||
I<duration> must be in whole seconds, but can be expressed as floats
|
||||
postfixed with B<s>, B<m>, B<h>, or B<d> which would multiply the
|
||||
float by 1, 60, 3600, or 86400. Thus these are equivalent:
|
||||
B<--blocktimeout 100000> and B<--blocktimeout 1d3.5h16.6m4s>.
|
||||
|
||||
I<duration> is in seconds, but can be postfixed with s, m, h, or d
|
||||
(see the section TIME POSTFIXES).
|
||||
|
||||
|
||||
=item B<--cat>
|
||||
|
|
@ -659,7 +687,7 @@ you can do: B<parallel --pipe --cat wc {}>.
|
|||
|
||||
Implies B<--pipe> unless B<--pipepart> is used.
|
||||
|
||||
See also: B<--fifo>.
|
||||
See also: B<--fifo>
|
||||
|
||||
|
||||
=item B<--cleanup>
|
||||
|
|
@ -706,15 +734,18 @@ https://perldoc.perl.org/perlre.html
|
|||
|
||||
=item B<--compress>
|
||||
|
||||
Compress temporary files. If the output is big and very compressible
|
||||
this will take up less disk space in $TMPDIR and possibly be faster
|
||||
due to less disk I/O.
|
||||
Compress temporary files.
|
||||
|
||||
If the output is big and very compressible this will take up less disk
|
||||
space in $TMPDIR and possibly be faster due to less disk I/O.
|
||||
|
||||
GNU B<parallel> will try B<pzstd>, B<lbzip2>, B<pbzip2>, B<zstd>,
|
||||
B<pigz>, B<lz4>, B<lzop>, B<plzip>, B<lzip>, B<lrz>, B<gzip>, B<pxz>,
|
||||
B<lzma>, B<bzip2>, B<xz>, B<clzip>, in that order, and use the first
|
||||
available.
|
||||
|
||||
See also: B<--compress-program>
|
||||
|
||||
|
||||
=item B<--compress-program> I<prg>
|
||||
|
||||
|
|
@ -745,21 +776,25 @@ When used with B<--pipe> only pass full CSV-records.
|
|||
|
||||
=item B<--ctag> I<str>
|
||||
|
||||
Color tag. See B<--tag>.
|
||||
Color tag.
|
||||
|
||||
See also: B<--tag>
|
||||
|
||||
|
||||
=item B<--ctagstring> I<str>
|
||||
|
||||
Color tagstring. See B<--tagstring>.
|
||||
Color tagstring.
|
||||
|
||||
See also: B<--tagstring>
|
||||
|
||||
|
||||
=item B<--delay> I<mytime>
|
||||
|
||||
Delay starting next job by I<mytime>. GNU B<parallel> will pause
|
||||
I<mytime> after starting each job. I<mytime> is normally in seconds,
|
||||
but can be floats postfixed with B<s>, B<m>, B<h>, or B<d> which would
|
||||
multiply the float by 1, 60, 3600, or 86400. Thus these are
|
||||
equivalent: B<--delay 100000> and B<--delay 1d3.5h16.6m4s>.
|
||||
Delay starting next job by I<mytime>.
|
||||
|
||||
GNU B<parallel> will pause I<mytime> after starting each
|
||||
job. I<mytime> is in seconds, but can be postfixed with s, m, h, or d
|
||||
(see the section TIME POSTFIXES).
|
||||
|
||||
If you append 'auto' to I<mytime> (e.g. 13m3sauto) GNU B<parallel> will
|
||||
automatically try to find the optimal value: If a job fails, I<mytime>
|
||||
|
|
@ -770,13 +805,12 @@ is doubled. If a job succeeds, I<mytime> is decreased by 10%.
|
|||
|
||||
=item B<-d> I<delim>
|
||||
|
||||
Input items are terminated by I<delim>. Quotes and backslash are not
|
||||
special; every character in the input is taken literally. Disables
|
||||
the end-of-file string, which is treated like any other argument. The
|
||||
specified delimiter may be characters, C-style character escapes such
|
||||
as \n, or octal or hexadecimal escape codes. Octal and hexadecimal
|
||||
escape codes are understood as for the printf command. Multibyte
|
||||
characters are not supported.
|
||||
Input items are terminated by I<delim>.
|
||||
|
||||
The specified delimiter may be characters, C-style character escapes
|
||||
such as \n, or octal or hexadecimal escape codes. Octal and
|
||||
hexadecimal escape codes are understood as for the printf command.
|
||||
Multibyte characters are not supported.
|
||||
|
||||
|
||||
=item B<--dirnamereplace> I<replace-str>
|
||||
|
|
@ -841,7 +875,7 @@ variables except for the ones mentioned in ~/.parallel/ignored_vars.
|
|||
To copy the full environment (both exported and not exported
|
||||
variables, arrays, and functions) use B<env_parallel>.
|
||||
|
||||
See also: B<--record-env>, B<--session>.
|
||||
See also: B<--record-env> B<--session>
|
||||
|
||||
|
||||
=item B<--eta>
|
||||
|
|
@ -855,7 +889,7 @@ estimate will only be shown when the first job has finished.
|
|||
|
||||
Implies B<--progress>.
|
||||
|
||||
See also: B<--bar>, B<--progress>.
|
||||
See also: B<--bar> B<--progress>
|
||||
|
||||
|
||||
=item B<--fg>
|
||||
|
|
@ -870,21 +904,27 @@ foreground (opposite B<--bg>), and wait for completion of the command
|
|||
before exiting.
|
||||
|
||||
|
||||
See also: B<--bg>, B<man sem>.
|
||||
See also: B<--bg> B<man sem>
|
||||
|
||||
|
||||
=item B<--fifo>
|
||||
|
||||
Create a temporary fifo with content. Normally B<--pipe> and
|
||||
B<--pipepart> will give data to the program on stdin (standard
|
||||
input). With B<--fifo> GNU B<parallel> will create a temporary fifo
|
||||
with the name in B<{}>, so you can do: B<parallel --pipe --fifo wc {}>.
|
||||
Create a temporary fifo with content.
|
||||
|
||||
Beware: If data is not read from the fifo, the job will block forever.
|
||||
Normally B<--pipe> and B<--pipepart> will give data to the program on
|
||||
stdin (standard input). With B<--fifo> GNU B<parallel> will create a
|
||||
temporary fifo with the name in B<{}>, so you can do:
|
||||
|
||||
parallel --pipe --fifo wc {}
|
||||
|
||||
Beware: If the fifo is never opened for reading, the job will block forever:
|
||||
|
||||
seq 1000000 | parallel --fifo echo This will block
|
||||
seq 1000000 | parallel --fifo 'echo This will not block < {}'
|
||||
|
||||
Implies B<--pipe> unless B<--pipepart> is used.
|
||||
|
||||
See also: B<--cat>.
|
||||
See also: B<--cat>
|
||||
|
||||
|
||||
=item B<--filter> I<filter>
|
||||
|
|
@ -1005,7 +1045,9 @@ UserID when grouping:
|
|||
cat table.csv | parallel --pipe --colsep , --header : \
|
||||
--group-by 'UserID s/\D//g' -kN1 wc
|
||||
|
||||
See also: B<--shard>, B<--roundrobin>.
|
||||
See the section: SPREADING BLOCKS OF DATA.
|
||||
|
||||
See also: B<--bin> B<--shard> B<--roundrobin>
|
||||
|
||||
|
||||
=item B<--help>
|
||||
|
|
@ -1145,7 +1187,7 @@ B<my_grp1_arg> may be run on either B<myserver1> or B<myserver2>,
|
|||
B<third> may be run on either B<myserver1> or B<myserver3>,
|
||||
but B<arg_for_grp2> will only be run on B<myserver2>.
|
||||
|
||||
See also: B<--sshlogin>, B<$PARALLEL_HOSTGROUPS>, B<$PARALLEL_ARGHOSTGROUPS>.
|
||||
See also: B<--sshlogin> B<$PARALLEL_HOSTGROUPS> B<$PARALLEL_ARGHOSTGROUPS>
|
||||
|
||||
|
||||
=item B<-I> I<replace-str>
|
||||
|
|
@ -1185,7 +1227,7 @@ If the host is long, you can use B<column -t> to pretty print it:
|
|||
|
||||
cat joblog | column -t
|
||||
|
||||
See also: B<--resume> B<--resume-failed>.
|
||||
See also: B<--resume> B<--resume-failed>
|
||||
|
||||
|
||||
=item B<--jobs> I<N>
|
||||
|
|
@ -1234,9 +1276,10 @@ B<--use-sockets-instead-of-threads>.
|
|||
=item B<-P> I<-N>
|
||||
|
||||
Subtract N from the number of CPUs. Run this many jobs in parallel.
|
||||
If the evaluated number is less than 1 then 1 will be used. See also
|
||||
B<--use-cores-instead-of-threads> and
|
||||
B<--use-sockets-instead-of-threads>.
|
||||
If the evaluated number is less than 1 then 1 will be used.
|
||||
|
||||
See also: B<--use-cores-instead-of-threads>
|
||||
B<--use-sockets-instead-of-threads>
|
||||
|
||||
|
||||
=item B<--jobs> I<N>%
|
||||
|
|
@ -1248,8 +1291,10 @@ B<--use-sockets-instead-of-threads>.
|
|||
=item B<-P> I<N>%
|
||||
|
||||
Multiply N% with the number of CPUs. Run this many jobs in
|
||||
parallel. See also B<--use-cores-instead-of-threads> and
|
||||
B<--use-sockets-instead-of-threads>.
|
||||
parallel.
|
||||
|
||||
See also: B<--use-cores-instead-of-threads>
|
||||
B<--use-sockets-instead-of-threads>
|
||||
|
||||
|
||||
=item B<--jobs> I<procfile>
|
||||
|
|
@ -1284,8 +1329,13 @@ to see the difference:
|
|||
If used with B<--onall> or B<--nonall> the output will grouped by
|
||||
sshlogin in sorted order.
|
||||
|
||||
If used with B<--pipe --roundrobin> and the same input, the jobslots
|
||||
will get the same blocks in the same order in every run.
|
||||
B<--keep-order> cannot keep the output order when used with B<--pipe
|
||||
--roundrobin>. Here it instead means, that the jobslots will get the
|
||||
same blocks as input in the same order in every run if the input is
|
||||
kept the same. Run each of these twice and compare:
|
||||
|
||||
seq 10000000 | parallel --pipe --roundrobin 'sleep 0.$RANDOM; wc'
|
||||
seq 10000000 | parallel --pipe -k --roundrobin 'sleep 0.$RANDOM; wc'
|
||||
|
||||
B<-k> only affects the order in which the output is printed - not the
|
||||
order in which jobs are run.
|
||||
|
|
@ -1403,12 +1453,12 @@ See also: B<--group> B<--ungroup>
|
|||
|
||||
=item B<--link>
|
||||
|
||||
Link input sources. Read multiple input sources like B<xapply>. If
|
||||
multiple input sources are given, one argument will be read from each
|
||||
of the input sources. The arguments can be accessed in the command as
|
||||
B<{1}> .. B<{>I<n>B<}>, so B<{1}> will be a line from the first input
|
||||
source, and B<{6}> will refer to the line with the same line number
|
||||
from the 6th input source.
|
||||
Link input sources. Read multiple input sources like the command
|
||||
B<xapply>. If multiple input sources are given, one argument will be
|
||||
read from each of the input sources. The arguments can be accessed in
|
||||
the command as B<{1}> .. B<{>I<n>B<}>, so B<{1}> will be a line from
|
||||
the first input source, and B<{6}> will refer to the line with the
|
||||
same line number from the 6th input source.
|
||||
|
||||
Compare these two:
|
||||
|
||||
|
|
@ -1458,19 +1508,21 @@ most likely do what is needed.
|
|||
|
||||
=item B<--memfree> I<size>
|
||||
|
||||
Minimum memory free when starting another job. The I<size> can be
|
||||
postfixed with K, M, G, T, P, k, m, g, t, or p (see UNIT PREFIX).
|
||||
Minimum memory free when starting another job.
|
||||
|
||||
The I<size> can be postfixed with K, M, G, T, P, k, m, g, t, or p (see
|
||||
UNIT PREFIX).
|
||||
|
||||
If the jobs take up very different amount of RAM, GNU B<parallel> will
|
||||
only start as many as there is memory for. If less than I<size> bytes
|
||||
are free, no more jobs will be started. If less than 50% I<size> bytes
|
||||
are free, the youngest job will be killed, and put back on the queue
|
||||
to be run later.
|
||||
are free, the youngest job will be killed (as per B<--termseq>), and
|
||||
put back on the queue to be run later.
|
||||
|
||||
B<--retries> must be set to determine how many times GNU B<parallel>
|
||||
should retry a given job.
|
||||
|
||||
See also: B<--memsuspend>
|
||||
See also: B<--termseq>, B<--retries>, B<--memsuspend>
|
||||
|
||||
|
||||
=item B<--memsuspend> I<size>
|
||||
|
|
@ -1595,29 +1647,30 @@ Spread input to jobs on stdin (standard input). Read a block of data
|
|||
from stdin (standard input) and give one block of data as input to one
|
||||
job.
|
||||
|
||||
The block size is determined by B<--block>. The strings B<--recstart>
|
||||
and B<--recend> tell GNU B<parallel> how a record starts and/or
|
||||
ends. The block read will have the final partial record removed before
|
||||
the block is passed on to the job. The partial record will be
|
||||
The block size is determined by B<--block> (default: 1M). The strings
|
||||
B<--recstart> and B<--recend> tell GNU B<parallel> how a record starts
|
||||
and/or ends. The block read will have the final partial record removed
|
||||
before the block is passed on to the job. The partial record will be
|
||||
prepended to next block.
|
||||
|
||||
If B<--recstart> is given this will be used to split at record start.
|
||||
|
||||
If B<--recend> is given this will be used to split at record end.
|
||||
|
||||
If both B<--recstart> and B<--recend> are given both will have to
|
||||
match to find a split position.
|
||||
|
||||
If neither B<--recstart> nor B<--recend> are given B<--recend>
|
||||
defaults to '\n'. To have no record separator use B<--recend "">.
|
||||
|
||||
B<--files> is often used with B<--pipe>.
|
||||
You can limit the number of records to be passed with B<-N>, and set
|
||||
the record size with B<-L>.
|
||||
|
||||
B<--pipe> maxes out at around 1 GB/s input, and 100 MB/s output. If
|
||||
performance is important use B<--pipepart>.
|
||||
|
||||
See also: B<--recstart>, B<--recend>, B<--fifo>, B<--cat>,
|
||||
B<--pipepart>, B<--files>.
|
||||
B<--fifo> and B<--cat> will give stdin (standard input) on a fifo or a
|
||||
temporary file.
|
||||
|
||||
If data is arriving slowly, you can use B<--blocktimeout> to finish
|
||||
reading a block early.
|
||||
|
||||
The data can be spread between the jobs in specific ways using
|
||||
B<--round-robin>, B<--bin>, B<--shard>, B<--group-by>. See the
|
||||
section: SPREADING BLOCKS OF DATA
|
||||
|
||||
See also: B<--block>, B<--blocktimeout>, B<--recstart>, B<--recend>,
|
||||
B<--fifo>, B<--cat>, B<--pipepart>, B<-N>, B<-L>.
|
||||
|
||||
|
||||
=item B<--pipepart>
|
||||
|
|
@ -1646,6 +1699,8 @@ where records end.
|
|||
|
||||
=back
|
||||
|
||||
See also: <--pipe>.
|
||||
|
||||
|
||||
=item B<--plain>
|
||||
|
||||
|
|
@ -1805,17 +1860,19 @@ I<profilename> corresponds to the file ~/.parallel/I<profilename>.
|
|||
You can give multiple profiles by repeating B<--profile>. If parts of
|
||||
the profiles conflict, the later ones will be used.
|
||||
|
||||
Default: config
|
||||
Default: ~/.parallel/config
|
||||
|
||||
|
||||
=item B<--quote>
|
||||
|
||||
=item B<-q>
|
||||
|
||||
Quote I<command>. If your command contains special characters that
|
||||
should not be interpreted by the shell (e.g. ; \ | *), use B<--quote> to
|
||||
escape these. The command must be a simple command (see B<man
|
||||
bash>) without redirections and without variable assignments.
|
||||
Quote I<command>.
|
||||
|
||||
If your command contains special characters that should not be
|
||||
interpreted by the shell (e.g. ; \ | *), use B<--quote> to escape
|
||||
these. The command must be a simple command (see B<man bash>) without
|
||||
redirections and without variable assignments.
|
||||
|
||||
See the section QUOTING. Most people will not need this. Quoting is
|
||||
disabled by default.
|
||||
|
|
@ -1825,7 +1882,8 @@ disabled by default.
|
|||
|
||||
=item B<-r>
|
||||
|
||||
If the stdin (standard input) only contains whitespace, do not run the command.
|
||||
If the stdin (standard input) only contains whitespace, do not run the
|
||||
command.
|
||||
|
||||
If used with B<--pipe> this is slow.
|
||||
|
||||
|
|
@ -1845,13 +1903,15 @@ problem, but both swapping in and out usually indicates a problem.
|
|||
B<--memfree> and B<--memsuspend> may give better results, so try using
|
||||
those first.
|
||||
|
||||
See also: B<--memfree> B<--memsuspend>
|
||||
|
||||
|
||||
=item B<--record-env>
|
||||
|
||||
Record current environment variables in ~/.parallel/ignored_vars. This
|
||||
is useful before using B<--env _>.
|
||||
|
||||
See also: B<--env>, B<--session>.
|
||||
See also: B<--env> B<--session>
|
||||
|
||||
|
||||
=item B<--recstart> I<startstring>
|
||||
|
|
@ -1867,14 +1927,20 @@ I<endstring>I<startstring> will have to match to find a split
|
|||
position. This is useful if either I<startstring> or I<endstring>
|
||||
match in the middle of a record.
|
||||
|
||||
If neither B<--recstart> nor B<--recend> are given then B<--recend>
|
||||
defaults to '\n'. To have no record separator use B<--recend "">.
|
||||
If neither B<--recstart> nor B<--recend> are given, then B<--recend>
|
||||
defaults to '\n'. To have no record separator (e.g. for binary files)
|
||||
use B<--recend "">.
|
||||
|
||||
B<--recstart> and B<--recend> are used with B<--pipe>.
|
||||
|
||||
Use B<--regexp> to interpret B<--recstart> and B<--recend> as regular
|
||||
expressions. This is slow, however.
|
||||
|
||||
Use B<--remove-rec-sep> to remove B<--recstart> and B<--recend> before
|
||||
passing the block to the job.
|
||||
|
||||
See also: B<--pipe> B<--regexp> B<--remove-rec-sep>
|
||||
|
||||
|
||||
=item B<--regexp>
|
||||
|
||||
|
|
@ -1891,7 +1957,7 @@ expressions. This is slow, however.
|
|||
Remove the text matched by B<--recstart> and B<--recend> before piping
|
||||
it to the command.
|
||||
|
||||
Only used with B<--pipe>.
|
||||
Only used with B<--pipe>/B<--pipepart>.
|
||||
|
||||
|
||||
=item B<--results> I<name>
|
||||
|
|
@ -2017,7 +2083,7 @@ will generate the files:
|
|||
my_foo/stderr
|
||||
my_foo/stdout
|
||||
|
||||
See also: B<--files>, B<--tag>, B<--header>, B<--joblog>.
|
||||
See also: B<--files> B<--tag> B<--header> B<--joblog>
|
||||
|
||||
|
||||
=item B<--resume>
|
||||
|
|
@ -2029,7 +2095,7 @@ sequence numbers in B<--joblog> then the input, the command, and
|
|||
B<--joblog> all have to remain unchanged; otherwise GNU B<parallel>
|
||||
may run wrong commands.
|
||||
|
||||
See also: B<--joblog>, B<--results>, B<--resume-failed>, B<--retries>.
|
||||
See also: B<--joblog> B<--results> B<--resume-failed> B<--retries>
|
||||
|
||||
|
||||
=item B<--resume-failed>
|
||||
|
|
@ -2042,7 +2108,7 @@ numbers in B<--joblog> then the input, the command, and B<--joblog>
|
|||
all have to remain unchanged; otherwise GNU B<parallel> may run wrong
|
||||
commands.
|
||||
|
||||
See also: B<--joblog>, B<--resume>, B<--retry-failed>, B<--retries>.
|
||||
See also: B<--joblog> B<--resume> B<--retry-failed> B<--retries>
|
||||
|
||||
|
||||
=item B<--retry-failed>
|
||||
|
|
@ -2112,7 +2178,7 @@ line:
|
|||
6 [...] 2 0 echo 5;sleep .5; exit 2
|
||||
4 [...] 1 0 echo 7;sleep .7; exit 1
|
||||
|
||||
See also: B<--joblog>, B<--resume>, B<--resume-failed>, B<--retries>.
|
||||
See also: B<--joblog> B<--resume> B<--resume-failed> B<--retries>
|
||||
|
||||
|
||||
=item B<--retries> I<n>
|
||||
|
|
@ -2181,7 +2247,9 @@ impossible to track which input block corresponds to which output.
|
|||
|
||||
B<--roundrobin> implies B<--pipe>, except if B<--pipepart> is given.
|
||||
|
||||
See also: B<--group-by>, B<--shard>.
|
||||
See the section: SPREADING BLOCKS OF DATA.
|
||||
|
||||
See also: B<--bin> B<--group-by> B<--shard>
|
||||
|
||||
|
||||
=item B<--rpl> 'I<tag> I<perl expression>'
|
||||
|
|
@ -2309,7 +2377,7 @@ Used with B<--fg>, B<--wait>, and B<--semaphorename>.
|
|||
|
||||
The command B<sem> is an alias for B<parallel --semaphore>.
|
||||
|
||||
See also: B<man sem>.
|
||||
See also: B<man sem>
|
||||
|
||||
|
||||
=item B<--semaphorename> I<name>
|
||||
|
|
@ -2327,20 +2395,25 @@ The semaphore is stored in ~/.parallel/semaphores/
|
|||
|
||||
Implies B<--semaphore>.
|
||||
|
||||
See also: B<man sem>.
|
||||
See also: B<man sem>
|
||||
|
||||
|
||||
=item B<--semaphoretimeout> I<secs>
|
||||
|
||||
=item B<--st> I<secs>
|
||||
|
||||
If I<secs> > 0: If the semaphore is not released within I<secs> seconds, take it anyway.
|
||||
If I<secs> > 0: If the semaphore is not released within I<secs>
|
||||
seconds, take it anyway.
|
||||
|
||||
If I<secs> < 0: If the semaphore is not released within I<secs> seconds, exit.
|
||||
If I<secs> < 0: If the semaphore is not released within I<secs>
|
||||
seconds, exit.
|
||||
|
||||
I<secs> is in seconds, but can be postfixed with s, m, h, or d (see
|
||||
the section TIME POSTFIXES).
|
||||
|
||||
Implies B<--semaphore>.
|
||||
|
||||
See also: B<man sem>.
|
||||
See also: B<man sem>
|
||||
|
||||
|
||||
=item B<--seqreplace> I<replace-str>
|
||||
|
|
@ -2357,15 +2430,19 @@ variables with names in B<$PARALLEL_IGNORED_NAMES> will not be copied.
|
|||
|
||||
Only supported in B<Ash, Bash, Dash, Ksh, Sh, and Zsh>.
|
||||
|
||||
See also: B<--env>, B<--record-env>.
|
||||
See also: B<--env> B<--record-env>
|
||||
|
||||
|
||||
=item B<--shard> I<shardexpr>
|
||||
|
||||
Use I<shardexpr> as shard key and shard input to the jobs.
|
||||
|
||||
I<shardexpr> is [column number|column name] [perlexpression] e.g. 3,
|
||||
Address, 3 $_%=100, Address s/\d//g.
|
||||
I<shardexpr> is [column number|column name] [perlexpression] e.g.:
|
||||
|
||||
3
|
||||
Address
|
||||
3 $_%=100
|
||||
Address s/\d//g
|
||||
|
||||
Each input line is split using B<--colsep>. The value of the column is
|
||||
put into $_, the perl expression is executed, the resulting value is
|
||||
|
|
@ -2379,7 +2456,9 @@ I<shardcol> is small (<10), slower if it is big (>100).
|
|||
|
||||
B<--shard> requires B<--pipe> and a fixed numeric value for B<--jobs>.
|
||||
|
||||
See also: B<--bin>, B<--group-by>, B<--roundrobin>.
|
||||
See the section: SPREADING BLOCKS OF DATA.
|
||||
|
||||
See also: B<--bin> B<--group-by> B<--roundrobin>
|
||||
|
||||
|
||||
=item B<--shebang>
|
||||
|
|
@ -2554,8 +2633,9 @@ For details on I<mytime> see B<--delay>.
|
|||
|
||||
=item B<--sshlogin> I<@hostgroup>
|
||||
|
||||
Distribute jobs to remote computers. The jobs will be run on a list of
|
||||
remote computers.
|
||||
Distribute jobs to remote computers.
|
||||
|
||||
The jobs will be run on a list of remote computers.
|
||||
|
||||
If I<hostgroups> is given, the I<sshlogin> will be added to that
|
||||
hostgroup. Multiple hostgroups are separated by '+'. The I<sshlogin>
|
||||
|
|
@ -2595,8 +2675,8 @@ The remote host must have GNU B<parallel> installed.
|
|||
|
||||
B<--sshlogin> is known to cause problems with B<-m> and B<-X>.
|
||||
|
||||
B<--sshlogin> is often used with B<--transferfile>, B<--return>,
|
||||
B<--cleanup>, and B<--trc>.
|
||||
See also: B<--transferfile> B<--return> B<--cleanup> B<--trc>
|
||||
B<--sshloginfile> B<--workdir>
|
||||
|
||||
|
||||
=item B<--sshloginfile> I<filename>
|
||||
|
|
@ -2721,9 +2801,11 @@ then killed. Process groups are dependant on the tty.
|
|||
|
||||
=item B<--tag>
|
||||
|
||||
Tag lines with arguments. Each output line will be prepended with the
|
||||
arguments and TAB (\t). When combined with B<--onall> or B<--nonall>
|
||||
the lines will be prepended with the sshlogin instead.
|
||||
Tag lines with arguments.
|
||||
|
||||
Each output line will be prepended with the arguments and TAB
|
||||
(\t). When combined with B<--onall> or B<--nonall> the lines will be
|
||||
prepended with the sshlogin instead.
|
||||
|
||||
B<--tag> is ignored when using B<-u>.
|
||||
|
||||
|
|
@ -2762,9 +2844,11 @@ How many words contain a..z and how many bytes do they fill?
|
|||
|
||||
=item B<--termseq> I<sequence>
|
||||
|
||||
Termination sequence. When a job is killed due to B<--timeout>,
|
||||
B<--memfree>, B<--halt>, or abnormal termination of GNU B<parallel>,
|
||||
I<sequence> determines how the job is killed. The default is:
|
||||
Termination sequence.
|
||||
|
||||
When a job is killed due to B<--timeout>, B<--memfree>, B<--halt>, or
|
||||
abnormal termination of GNU B<parallel>, I<sequence> determines how
|
||||
the job is killed. The default is:
|
||||
|
||||
TERM,200,TERM,100,TERM,50,KILL,25
|
||||
|
||||
|
|
@ -2776,10 +2860,13 @@ dies before the waiting time is up.
|
|||
|
||||
=item B<--tmpdir> I<dirname>
|
||||
|
||||
Directory for temporary files. GNU B<parallel> normally buffers output
|
||||
into temporary files in /tmp. By setting B<--tmpdir> you can use a
|
||||
different dir for the files. Setting B<--tmpdir> is equivalent to
|
||||
setting $TMPDIR.
|
||||
Directory for temporary files.
|
||||
|
||||
GNU B<parallel> normally buffers output into temporary files in
|
||||
/tmp. By setting B<--tmpdir> you can use a different dir for the
|
||||
files. Setting B<--tmpdir> is equivalent to setting $TMPDIR.
|
||||
|
||||
See also: B<--compress>
|
||||
|
||||
|
||||
=item B<--tmux> (Long beta testing)
|
||||
|
|
@ -2804,10 +2891,10 @@ If I<duration> is followed by a % then the timeout will dynamically be
|
|||
computed as a percentage of the median average runtime of successful
|
||||
jobs. Only values > 100% will make sense.
|
||||
|
||||
I<duration> is normally in seconds, but can be floats postfixed with
|
||||
B<s>, B<m>, B<h>, or B<d> which would multiply the float by 1, 60,
|
||||
3600, or 86400. Thus these are equivalent: B<--timeout 100000> and
|
||||
B<--timeout 1d3.5h16.6m4s>.
|
||||
I<duration> is in seconds, but can be postfixed with s, m, h, or d
|
||||
(see the section TIME POSTFIXES).
|
||||
|
||||
See also: B<--termseq>
|
||||
|
||||
|
||||
=item B<--verbose>
|
||||
|
|
@ -2816,7 +2903,7 @@ B<--timeout 1d3.5h16.6m4s>.
|
|||
|
||||
Print the job to be run on stderr (standard error).
|
||||
|
||||
See also: B<-v>, B<-p>.
|
||||
See also: B<-v> B<-p>
|
||||
|
||||
|
||||
=item B<--transfer>
|
||||
|
|
@ -2987,10 +3074,12 @@ compatibility.
|
|||
=item B<-v>
|
||||
|
||||
Verbose. Print the job to be run on stdout (standard output). Can be reversed
|
||||
with B<--silent>. See also B<-t>.
|
||||
with B<--silent>.
|
||||
|
||||
Use B<-v> B<-v> to print the wrapping ssh command when running remotely.
|
||||
|
||||
See also: B<-t>
|
||||
|
||||
|
||||
=item B<--version>
|
||||
|
||||
|
|
@ -3034,7 +3123,7 @@ Wait for all commands to complete.
|
|||
|
||||
Used with B<--semaphore> or B<--sqlmaster>.
|
||||
|
||||
See also: B<man sem>.
|
||||
See also: B<man sem>
|
||||
|
||||
|
||||
=item B<-X>
|
||||
|
|
@ -3054,7 +3143,7 @@ unexpected results if B<{}> is used as part of a word.
|
|||
|
||||
Support for B<-X> with B<--sshlogin> is limited and may fail.
|
||||
|
||||
See also: B<-m>.
|
||||
See also: B<-m>
|
||||
|
||||
|
||||
=item B<--exit>
|
||||
|
|
@ -3075,8 +3164,7 @@ with all the arguments.
|
|||
|
||||
Support for B<--xargs> with B<--sshlogin> is limited and may fail.
|
||||
|
||||
See also B<-X> for context replace. If in doubt use B<-X> as that will
|
||||
most likely do what is needed.
|
||||
See also: B<-X>
|
||||
|
||||
|
||||
=back
|
||||
|
|
@ -4878,7 +4966,7 @@ a chunk to the program.
|
|||
B<--pipe-part> starts one job per chunk - just like normal
|
||||
B<--pipe>. It first finds record endings near all block borders in the
|
||||
file and then starts the jobs. By using B<--block -1> it will set the
|
||||
block size to 1/I<n> * size-of-file. Used this way it will start I<n>
|
||||
block size to size-of-file/I<n>. Used this way it will start I<n>
|
||||
jobs in total.
|
||||
|
||||
B<--round-robin> starts I<n> jobs in total. It reads a block and
|
||||
|
|
@ -4906,6 +4994,14 @@ chunk border.
|
|||
B<--group-by> can be combined with B<--round-robin> or B<--pipe-part>.
|
||||
|
||||
|
||||
=head1 TIME POSTFIXES
|
||||
|
||||
Arguments that give a duration are given in seconds, but can be
|
||||
expressed as floats postfixed with B<s>, B<m>, B<h>, or B<d> which
|
||||
would multiply the float by 1, 60, 60*60, or 60*60*24. Thus these are
|
||||
equivalent: 100000 and 1d3.5h16.6m4s.
|
||||
|
||||
|
||||
=head1 UNIT PREFIX
|
||||
|
||||
Many numerical arguments in GNU B<parallel> can be postfixed with K,
|
||||
|
|
|
|||
|
|
@ -6,7 +6,6 @@
|
|||
|
||||
=encoding utf8
|
||||
|
||||
options as wrapper scripts
|
||||
|
||||
=head1 Design of GNU Parallel
|
||||
|
||||
|
|
|
|||
Loading…
Reference in a new issue