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parallel: Attempt 3 at fixing https://lists.gnu.org/archive/html/parallel/2020-08/msg00003.html
This commit is contained in:
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1
CREDITS
1
CREDITS
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@ -1,5 +1,6 @@
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People who have helped GNU Parallel different ways.
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Morten Rønne: Donating his old Mac for testing.
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Renan Valieris: Maintaining GNU Parallel for Anaconda Cloud.
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Jakub Kulík: Maintaining GNU Parallel for Solaris-userland.
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Rich Burridge: Maintaining GNU Parallel for Solaris-userland.
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63
src/parallel
63
src/parallel
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@ -2160,7 +2160,7 @@ sub check_invalid_option_combinations() {
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sub init_globals() {
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# Defaults:
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$Global::version = 20200815;
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$Global::version = 20200820;
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$Global::progname = 'parallel';
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$::name = "GNU Parallel";
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$Global::infinity = 2**31;
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@ -5351,7 +5351,7 @@ sub qqx(@) {
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# CygWin does not respect 2>/dev/null
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# so we do that by hand
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# This trick does not work:
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# https://stackoverflow.com/questions/13833088/why-doesnt-local-work-on-stderr-and-stdout
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# https://stackoverflow.com/q/13833088/363028
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# local *STDERR;
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# open(STDERR, ">", "/dev/null");
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open(local *CHILD_STDIN, '<', '/dev/null') or die $!;
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@ -5370,7 +5370,10 @@ sub qqx(@) {
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# Make sure $? is set
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waitpid($pid, 0);
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return wantarray ? @arr : join "",@arr;
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}
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} or do {
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# If eval fails, force $?=false
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`false`;
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};
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}
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}
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@ -10481,7 +10484,7 @@ sub slot($) {
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{
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my $already_spread;
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my $env_size;
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my $darwin_max_len;
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sub populate($) {
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# Add arguments from arg_queue until the number of arguments or
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@ -10499,6 +10502,28 @@ sub slot($) {
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my $next_arg;
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my $max_len = $Global::minimal_command_line_length
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|| Limits::Command::max_length();
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if($^O eq "darwin") {
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# env $((260932 - $single - $envc - $envl * 4 + 1064 ))
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# Darwin's limit is affected by:
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# * number of environment names (variables+functions)
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# * size of environment
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# * the length of arguments:
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# a one-char argument lowers the limit by 5
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# To be safe assume all arguments are one-char
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# The max_len is cached between runs, but if the size of
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# the environment is different we need to recompute the
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# usable max length for this run of GNU Parallel
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# See https://unix.stackexchange.com/a/604943/2972
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if(not $darwin_max_len) {
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my $envc = (keys %ENV);
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my $envn = length join"",(keys %ENV);
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my $envv = length join"",(values %ENV);
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$darwin_max_len = 3+($max_len - $envn - $envv) / 5 - $envc*2;
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::debug("init",
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"length: $darwin_max_len 3+($max_len - $envn - $envv) / 5 - $envc*2");
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}
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$max_len = $darwin_max_len;
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}
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if($opt::cat or $opt::fifo) {
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# Get the empty arg added by --pipepart (if any)
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$Global::JobQueue->{'commandlinequeue'}->{'arg_queue'}->get();
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@ -11501,33 +11526,9 @@ sub max_length($) {
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sub real_max_length() {
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# Find the max_length of a command line
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# Returns:
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# The maximal command line length
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if($^O eq "darwin") {
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# env $((-260932 + $envl *4 -1064 + $envc + $single))
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# Darwin's limit is affected by:
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# * number of environment names (variables+functions)
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# * size of environment
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# * the length of arguments:
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# a one-char argument lowers the limit by 5
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# To be safe assume all arguments are one-char
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my $max_len = find_max("x");
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my $env_size = (keys %ENV) * 4 + length(join'',%ENV);
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$max_len -= $env_size;
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# Small fudge constant I cannot explain
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$max_len -= 1064;
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# If all arguments are 1 char, the limit is 5x smaller
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$max_len /= 5;
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return $max_len;
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} else {
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return find_max("x");
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}
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}
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sub real_max_args() {
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# Find the max number of args allowed on a command line
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# Returns:
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# The maximal number of args allowed on a command line
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return find_max(" x");
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# The maximal command line length with 1 byte arguments
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# return find_max(" x");
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return find_max("x");
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}
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sub find_max($) {
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@ -5192,7 +5192,7 @@ Your bug report should always include:
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The error message you get (if any). If the error message is not from
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GNU B<parallel> you need to show why you think GNU B<parallel> caused
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these.
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this.
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=item *
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@ -5204,15 +5204,16 @@ version.
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=item *
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A minimal, complete, and verifiable example (See description on
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http://stackoverflow.com/help/mcve).
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https://stackoverflow.com/help/mcve).
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It should be a complete example that others can run that shows the
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It should be a complete example that others can run which shows the
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problem including all files needed to run the example. This should
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preferably be small and simple, so try to remove as many options as
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possible. A combination of B<yes>, B<seq>, B<cat>, B<echo>, B<wc>, and
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B<sleep> can reproduce most errors. If your example requires large
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files, see if you can make them with something like B<seq 100000000> >
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B<bigfile> or B<yes | head -n 1000000000> > B<file>.
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B<bigfile> or B<yes | head -n 1000000000> > B<file>. If you need
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multiple columns: B<paste <(seq 1000) <(seq 1000 1999)>
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If your example requires remote execution, see if you can use
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B<localhost> - maybe using another login.
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@ -5392,9 +5393,9 @@ For remote usage it uses B<rsync> with B<ssh>.
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=head1 SEE ALSO
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B<ssh>(1), B<ssh-agent>(1), B<sshpass>(1), B<ssh-copy-id>(1),
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B<rsync>(1), B<find>(1), B<xargs>(1), B<dirname>(1), B<make>(1),
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B<pexec>(1), B<ppss>(1), B<xjobs>(1), B<prll>(1), B<dxargs>(1),
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B<mdm>(1)
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B<parallel_tutorial>(1), B<env_parallel>(1), B<parset>(1),
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B<parsort>(1), B<parallel_alternatives>(1), B<parallel_design>(7),
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B<niceload>(1), B<sql>(1), B<ssh>(1), B<ssh-agent>(1), B<sshpass>(1),
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B<ssh-copy-id>(1), B<rsync>(1)
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=cut
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@ -3,103 +3,160 @@
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. `which env_parallel.bash`
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env_parallel --session
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true <<'EOF'
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#!/bin/bash
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# Find the command line limit formula
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# macosx.p = 10.7.5
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# El capitan = 10.11.4
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. `which binsearch`
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doit() {
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nfunc=$1
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lfunc=$2
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lfuncname=$3
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nvar=$4
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lvar=$5
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lvarname=$6
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varval="$(perl -e 'print "x "x('$lvar'/2)')"
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varname=$(perl -e 'print "x"x'$lvarname)
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funcval="$(perl -e 'print "x "x('$lfunc'/2)')"
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funcname=$(perl -e 'print "x"x'$lfuncname)
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for a in `seq $nvar`; do eval "export v$varname$a='$varval'" ; done
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for a in `seq $nfunc`; do eval "f$funcname$a() { $funcval; }" ; done
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for a in `seq $nfunc`; do eval "export -f f$funcname$a" ; done
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myrun() {
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/bin/echo $(perl -e 'print " x"x('$1'/2-5)')
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}
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export -f myrun
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binlen=dummy
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binlen=$(binsearch -q myrun)
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perl -e '
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$envc=(keys %ENV);
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$envn=length join"",(keys %ENV);
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$envv=length join"",(values %ENV);
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$maxlen=3+(262144 - $envn - $envv) / 5 - $envc*2;
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print("Max len = $maxlen\n");
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$bin='$binlen';
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print("$bin=",$bin-$maxlen," $envc $envn $envv\n");
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'
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}
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export -f doit
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val="$(seq 2 100 1000)"
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val="10 20 50 100 200 500 1000"
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val="11 23 57 101 207 503 1007"
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parallel --shuf --tag -k doit ::: $val ::: $val ::: $val ::: $val ::: $val ::: $val
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EOF
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# Each should generate at least 2 commands
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par_many_args() {
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rm -f ~/.parallel/tmp/sshlogin/*/linelen
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pecho() { perl -e 'print "@ARGV\n"' "$@"; }
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export -f pecho
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gen500k() { yes | head -c 131000; }
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geny() { yes | head -c $1; }
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for a in `seq 6000`; do eval "export a$a=1" ; done
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gen500k | stdout parallel --load 27 -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/\d{10,}.\d+ //g'
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geny 10000 | stdout parallel -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/( y){10,}//g'
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}
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par_many_var() {
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export LC_ALL=C
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rm -f ~/.parallel/tmp/sshlogin/*/linelen
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pecho() { perl -e 'print "@ARGV\n"' "$@"; }
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export -f pecho
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gen500k() { seq -f %f 1000000000000000 1000000000050000 | head -c 131000; }
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gen() { seq -f %f 1000000000000000 1000000000050000 | head -c $1; }
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for a in `seq 6000`; do eval "export a$a=1" ; done
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gen500k | stdout parallel --load 4 -Xkj1 'pecho {} {} {} {} | wc' |
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gen 10000 | stdout parallel -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/\d{10,}.\d+ //g'
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}
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par_many_var_func() {
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export LC_ALL=C
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rm -f ~/.parallel/tmp/sshlogin/*/linelen
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gen500k() { seq -f %f 1000000000000000 1000000000050000 | head -c 131000; }
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gen() { seq -f %f 1000000000000000 1000000000050000 | head -c $1; }
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pecho() { perl -e 'print "@ARGV\n"' "$@"; }
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export -f pecho
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for a in `seq 5000`; do eval "export a$a=1" ; done
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for a in `seq 5000`; do eval "a$a() { 1; }" ; done
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for a in `seq 5000`; do eval export -f a$a ; done
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gen500k | stdout parallel --load 20 -Xkj1 'pecho {} {} {} {} | wc' |
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for a in `seq 2000`; do eval "export a$a=1" ; done
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for a in `seq 2000`; do eval "a$a() { 1; }" ; done
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for a in `seq 2000`; do eval export -f a$a ; done
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gen 20000 | stdout parallel -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/\d{10,}.\d+ //g'
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}
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par_many_func() {
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export LC_ALL=C
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rm -f ~/.parallel/tmp/sshlogin/*/linelen
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gen500k() { seq -f %f 1000000000000000 1000000000050000 | head -c 131000; }
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gen() { seq -f %f 1000000000000000 1000000000050000 | head -c $1; }
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pecho() { perl -e 'print "@ARGV\n"' "$@"; }
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export -f pecho
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for a in `seq 5000`; do eval "a$a() { 1; }" ; done
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for a in `seq 5000`; do eval export -f a$a ; done
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gen500k | stdout parallel --load 5 -Xkj1 'pecho {} {} {} {} | wc' |
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gen 10000 | stdout parallel -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/\d{10,}.\d+ //g'
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}
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par_big_func() {
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export LC_ALL=C
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rm -f ~/.parallel/tmp/sshlogin/*/linelen
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gen500k() { seq -f %f 1000000000000000 1000000000050000 | head -c 131000; }
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gen() { seq -f %f 1000000000000000 1000000000050000 | head -c $1; }
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pecho() { perl -e 'print "@ARGV\n"' "$@"; }
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export -f pecho
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big=`seq 1000`
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for a in `seq 1`; do eval "a$a() { '$big'; }" ; done
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for a in `seq 1`; do eval export -f a$a ; done
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gen500k | stdout parallel --load 2 -Xkj1 'pecho {} {} {} {} | wc' |
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gen 20000 | stdout parallel --load 2 -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/\d{10,}.\d+ //g'
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}
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par_many_var_big_func() {
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export LC_ALL=C
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rm -f ~/.parallel/tmp/sshlogin/*/linelen
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gen500k() { seq -f %f 1000000000000000 1000000000050000 | head -c 131000; }
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gen() { seq -f %f 1000000000000000 1000000000050000 | head -c $1; }
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pecho() { perl -e 'print "@ARGV\n"' "$@"; }
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export -f pecho
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big=`seq 1000`
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for a in `seq 5000`; do eval "export a$a=1" ; done
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for a in `seq 10`; do eval "a$a() { '$big'; }" ; done
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for a in `seq 10`; do eval export -f a$a ; done
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gen500k | stdout parallel --load 5 -Xkj1 'pecho {} {} {} {} | wc' |
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gen 10000 | stdout parallel -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/\d{10,}.\d+ //g'
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}
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par_big_func_name() {
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export LC_ALL=C
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rm -f ~/.parallel/tmp/sshlogin/*/linelen
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gen500k() { seq -f %f 1000000000000000 1000000000050000 | head -c 131000; }
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gen() { seq -f %f 1000000000000000 1000000000050000 | head -c $1; }
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pecho() { perl -e 'print "@ARGV\n"' "$@"; }
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export -f pecho
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big=`perl -e print\"x\"x10000`
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for a in `seq 10`; do eval "export a$big$a=1" ; done
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gen500k | stdout parallel --load 5 -Xkj1 'pecho {} {} {} {} | wc' |
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gen 15000 | stdout parallel -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/\d{10,}.\d+ //g'
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}
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par_big_var_func_name() {
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export LC_ALL=C
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rm -f ~/.parallel/tmp/sshlogin/*/linelen
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gen500k() { seq -f %f 1000000000000000 1000000000050000 | head -c 131000; }
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gen() { seq -f %f 1000000000000000 1000000000050000 | head -c $1; }
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pecho() { perl -e 'print "@ARGV\n"' "$@"; }
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export -f pecho
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big=`perl -e print\"x\"x10000`
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for a in `seq 10`; do eval "export a$big$a=1" ; done
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for a in `seq 10`; do eval "a$big$a() { 1; }" ; done
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for a in `seq 10`; do eval export -f a$big$a ; done
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gen500k | stdout parallel --load 4 -Xkj1 'pecho {} {} {} {} | wc' |
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gen 10000 | stdout parallel --load 4 -Xkj1 'pecho {} {} {} {} | wc' |
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perl -pe 's/\d{10,}.\d+ //g'
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}
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scp /usr/local/bin/parallel macosx.p:bin/
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#macsshlogin=ota@mac
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macsshlogin=macosx.p
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scp /usr/local/bin/parallel $macsshlogin:bin/
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export LC_ALL=C
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export -f $(compgen -A function | grep par_)
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#compgen -A function |
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compgen -A function |
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grep par_ |
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LC_ALL=C sort |
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env_parallel --timeout 3000% --tag -k -S macosx.p
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env_parallel --timeout 1000% --tag -k -S 6/$macsshlogin 'PATH=$HOME/bin:$PATH; {}'
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