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src/parallel: --trc works for minimal examples.
This commit is contained in:
parent
fc7fba878b
commit
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80
src/parallel
80
src/parallel
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@ -1181,8 +1181,12 @@ sub parse_options {
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"max-line-length-allowed" => \$::opt_max_line_length_allowed,
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"max-line-length-allowed" => \$::opt_max_line_length_allowed,
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"number-of-cpus" => \$::opt_number_of_cpus,
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"number-of-cpus" => \$::opt_number_of_cpus,
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"number-of-cores" => \$::opt_number_of_cores,
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"number-of-cores" => \$::opt_number_of_cores,
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"sshlogin|S=s" => \@Global::sshlogin,
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"sshlogin|S=s" => \@::opt_sshlogin,
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"sshloginfile=s" => \$::opt_sshloginfile,
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"sshloginfile=s" => \$::opt_sshloginfile,
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"return=s" => \@::opt_return,
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"trc=s" => \@::opt_trc,
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"transfer" => \$::opt_transfer,
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"cleanup" => \$::opt_cleanup,
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# xargs-compatibility - implemented, man, unittest
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# xargs-compatibility - implemented, man, unittest
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"max-procs|P=s" => \$::opt_P,
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"max-procs|P=s" => \$::opt_P,
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"delimiter|d=s" => \$::opt_d,
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"delimiter|d=s" => \$::opt_d,
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@ -1200,7 +1204,6 @@ sub parse_options {
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## xargs-compatibility - implemented, man - unittest missing
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## xargs-compatibility - implemented, man - unittest missing
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"interactive|p" => \$::opt_p,
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"interactive|p" => \$::opt_p,
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## How to unittest? tty skal emuleres
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## How to unittest? tty skal emuleres
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# xargs-compatibility - unimplemented
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# xargs-compatibility - unimplemented
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"L=i" => \$::opt_L,
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"L=i" => \$::opt_L,
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"max-lines|l:i" => \$::opt_l,
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"max-lines|l:i" => \$::opt_l,
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@ -1236,7 +1239,14 @@ sub parse_options {
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if(defined $::opt_max_line_length_allowed) { print real_max_length(),"\n"; exit(0); }
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if(defined $::opt_max_line_length_allowed) { print real_max_length(),"\n"; exit(0); }
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if(defined $::opt_version) { version(); exit(0); }
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if(defined $::opt_version) { version(); exit(0); }
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if(defined $::opt_show_limits) { show_limits(); }
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if(defined $::opt_show_limits) { show_limits(); }
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if(defined @::opt_sshlogin) { @Global::sshlogin = @::opt_sshlogin; }
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if(defined $::opt_sshloginfile) { read_sshloginfile($::opt_sshloginfile); }
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if(defined $::opt_sshloginfile) { read_sshloginfile($::opt_sshloginfile); }
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if(defined @::opt_return) { push @Global::ret_files, @::opt_return; }
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if(defined @::opt_trc) {
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push @Global::ret_files, @::opt_trc;
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$::opt_transfer = 1;
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$::opt_cleanup = 1;
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}
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if(defined $::opt_a) {
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if(defined $::opt_a) {
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if(not open(ARGFILE,"<".$::opt_a)) {
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if(not open(ARGFILE,"<".$::opt_a)) {
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@ -1248,7 +1258,7 @@ sub parse_options {
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if(@ARGV) {
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if(@ARGV) {
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if($Global::quoting) {
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if($Global::quoting) {
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$Global::command = join(" ", shell_quote(@ARGV));
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$Global::command = shell_quote(@ARGV);
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} else {
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} else {
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$Global::command = join(" ", @ARGV);
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$Global::command = join(" ", @ARGV);
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}
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}
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@ -1276,6 +1286,12 @@ sub parse_options {
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# Generating the command line
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# Generating the command line
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#
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#
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sub no_extension {
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my $no_ext = shift;
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$no_ext =~ s/\.[^\.]*$//; # Remove .ext from argument
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return $no_ext;
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}
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sub generate_command_line {
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sub generate_command_line {
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my $command = shift;
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my $command = shift;
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my ($job_line,$last_good);
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my ($job_line,$last_good);
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@ -1290,8 +1306,7 @@ sub generate_command_line {
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# max number of lines (-L) =
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# max number of lines (-L) =
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# number_of_read_lines = 0
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# number_of_read_lines = 0
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while (defined($next_arg = get_next_arg())) {
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while (defined($next_arg = get_next_arg())) {
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my $next_arg_no_ext = $next_arg;
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my $next_arg_no_ext = no_extension($next_arg);
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$next_arg_no_ext =~ s/\.[^\.]*$//; # Remove .ext from argument
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# if defined max_number_of_lines
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# if defined max_number_of_lines
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# number_of_read_lines++
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# number_of_read_lines++
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# if $next_arg =~ /\w$/ then number_of_read_lines--
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# if $next_arg =~ /\w$/ then number_of_read_lines--
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@ -1349,7 +1364,7 @@ sub generate_command_line {
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}
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}
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debug("Return jobline: $job_line\n");
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debug("Return jobline: $job_line\n");
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}
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}
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return $job_line;
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return ($job_line,\@quoted_args);
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}
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}
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@ -1376,7 +1391,6 @@ sub xargs_computations {
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if($Global::Xargs) {
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if($Global::Xargs) {
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$c =~ s/\S*\Q$Global::replacestring\E\S*//go;
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$c =~ s/\S*\Q$Global::replacestring\E\S*//go;
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$c =~ s/\S*\Q$Global::replace_no_ext\E\S*//go;
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$c =~ s/\S*\Q$Global::replace_no_ext\E\S*//go;
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$length_of_command_no_args = length($c) - 1;
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$length_of_command_no_args = length($c) - 1;
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$length_of_context = length($command) - $length_of_command_no_args
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$length_of_context = length($command) - $length_of_command_no_args
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- $no_of_replace * length($Global::replacestring)
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- $no_of_replace * length($Global::replacestring)
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@ -1403,8 +1417,7 @@ sub shell_quote {
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$arg =~ s/([\002-\011\013-\032])/\\$1/g;
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$arg =~ s/([\002-\011\013-\032])/\\$1/g;
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$arg =~ s/([\n])/'\n'/g; # filenames with '\n' is quoted using \'
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$arg =~ s/([\n])/'\n'/g; # filenames with '\n' is quoted using \'
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}
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}
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#return wantarray ? @strings : "@strings";
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return wantarray ? @strings : "@strings";
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return @strings;
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}
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}
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# Replace foo{}bar or foo{.}bar
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# Replace foo{}bar or foo{.}bar
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@ -1508,7 +1521,7 @@ sub processes_available_by_system_limit {
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my $sshlogin = shift;
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my $sshlogin = shift;
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my $system_limit=0;
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my $system_limit=0;
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my @command_lines=();
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my @command_lines=();
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my $next_command_line;
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my ($next_command_line, $args_ref);
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my $more_filehandles;
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my $more_filehandles;
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my $max_system_proc_reached=0;
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my $max_system_proc_reached=0;
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my $spawning_too_slow=0;
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my $spawning_too_slow=0;
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@ -1528,9 +1541,9 @@ sub processes_available_by_system_limit {
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# If there are no more command lines, then we have a process
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# If there are no more command lines, then we have a process
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# per command line, so no need to go further
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# per command line, so no need to go further
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$next_command_line = next_command_line();
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($next_command_line, $args_ref) = next_command_line();
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if(defined $next_command_line) {
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if(defined $next_command_line) {
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push(@command_lines, $next_command_line);
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push(@command_lines, $next_command_line, $args_ref);
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}
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}
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# Every simultaneous process uses 2 filehandles when grouping
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# Every simultaneous process uses 2 filehandles when grouping
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@ -1585,7 +1598,7 @@ sub processes_available_by_system_limit {
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waitpid($pid,0);
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waitpid($pid,0);
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}
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}
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wait();
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wait();
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# Cleanup: Unget the command_lines
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# Cleanup: Unget the command_lines (and args_refs)
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unget_command_line(@command_lines);
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unget_command_line(@command_lines);
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return $system_limit;
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return $system_limit;
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}
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}
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@ -1727,26 +1740,49 @@ sub init_run_jobs {
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$SIG{TERM} = \&StartNoNewJobs;
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$SIG{TERM} = \&StartNoNewJobs;
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}
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}
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sub login_and_host {
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my $sshlogin = shift;
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$sshlogin =~ /(\S+$)/ or die;
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return $1;
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}
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sub next_command_line_with_sshlogin {
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sub next_command_line_with_sshlogin {
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my $sshlogin = shift;
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my $sshlogin = shift;
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my $next_command_line = next_command_line();
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my ($next_command_line, $args_ref) = next_command_line();
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my ($pre,$post)=("","");
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if($next_command_line and $sshlogin ne ":") {
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if($next_command_line and $sshlogin ne ":") {
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return "ssh $sshlogin ".join("",shell_quote($next_command_line));
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my $remote = login_and_host($sshlogin);
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for my $file (@$args_ref) {
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$file =~ s:^([^/]):./$1:; # If relative path: prepend ./ (to avoid problems with ':')
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if($::opt_transfer) {
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$pre = "rsync -az $file $remote:".shell_quote($file)." ;";
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}
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for my $ret_file (@Global::ret_files) {
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my $remove = $::opt_cleanup ? "--remove-source-files" : "";
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my $replaced = context_replace($ret_file,[$file],[no_extension($file)]);
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$post .= "rsync -az $remove $remote:".shell_quote($replaced)." $replaced ;";
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}
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if($::opt_cleanup) {
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$post .= "ssh $sshlogin rm ".shell_quote($file).";";
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}
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}
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return "$pre ssh $sshlogin ".shell_quote($next_command_line)."; $post";
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} else {
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} else {
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return $next_command_line;
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return $next_command_line;
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}
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}
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}
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}
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sub next_command_line {
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sub next_command_line {
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my $cmd_line;
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my ($cmd_line,$args_ref);
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if(@Global::unget_next_command_line) {
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if(@Global::unget_next_command_line) {
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$cmd_line = shift @Global::unget_next_command_line;
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$cmd_line = shift @Global::unget_next_command_line;
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$args_ref = shift @Global::unget_next_command_line;
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} else {
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} else {
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do {
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do {
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$cmd_line = generate_command_line($Global::command);
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($cmd_line,$args_ref) = generate_command_line($Global::command);
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} while (defined $cmd_line and $cmd_line =~ /^\s*$/); # Skip empty lines
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} while (defined $cmd_line and $cmd_line =~ /^\s*$/); # Skip empty lines
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}
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}
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return $cmd_line;
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return ($cmd_line,$args_ref);
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}
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}
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sub unget_command_line {
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sub unget_command_line {
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@ -1774,7 +1810,7 @@ sub get_next_arg {
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}
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}
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}
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}
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if($Global::input_is_filename) {
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if($Global::input_is_filename) {
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($arg) = shell_quote($arg);
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$arg = shell_quote($arg);
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}
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}
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}
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}
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debug("Next arg: ".$arg."\n");
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debug("Next arg: ".$arg."\n");
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@ -2193,3 +2229,9 @@ $main::opt_E = $main::opt_r = $Global::xargs = $Global::keeporder = 0;
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# blokkene samlet med den mest egnede algoritme.
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# blokkene samlet med den mest egnede algoritme.
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# Moved parse options to parse_options
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# Moved parse options to parse_options
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# TODO max_line_length on remote
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# TODO compute how many can be transferred within max_line_length
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# TODO Unittest with filename that is long and requires a lot of quoting. Will there be to many
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# TODO Unittest --trc without -S should warn
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# TODO Unittest --transfer file called ' : & ) *.jpg'
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@ -1,53 +1,53 @@
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1
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1
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2
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2
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3
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3
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sleep 1; echo 1
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1
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sleep 1; echo 2
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sleep 1; echo 2
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2
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2
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 3
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sleep 1; echo 1
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1
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 3;
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3
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3
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ssh nlv.pi.dk sleep\ 1\;\ echo\ \\\>/tmp/fire
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sleep 1; echo \>/tmp/fire
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>/tmp/fire
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>/tmp/fire
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sleep 1; echo 5
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sleep 1; echo 5
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5
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5
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sleep 1; echo 6
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 6;
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6
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6
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 7
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sleep 1; echo 7
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7
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7
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 8
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sleep 1; echo 8
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8
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8
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sleep 1; echo 9
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 9;
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9
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9
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sleep 1; echo 10
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sleep 1; echo 10
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10
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10
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sleep 1; hostname; echo 1
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sleep 1; hostname; echo 1
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alpha
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alpha
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1
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1
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sleep 1; hostname; echo 2
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 2;
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alpha
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nlv.pi.dk
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2
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2
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 3
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 3;
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nlv.pi.dk
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nlv.pi.dk
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3
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3
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ \\\>/tmp/fire
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ \\\>/tmp/fire;
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nlv.pi.dk
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nlv.pi.dk
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>/tmp/fire
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>/tmp/fire
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sleep 1; hostname; echo 5
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 5;
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alpha
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nlv.pi.dk
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5
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5
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sleep 1; hostname; echo 6
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 6;
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alpha
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nlv.pi.dk
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6
|
6
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 7
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 7;
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nlv.pi.dk
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nlv.pi.dk
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7
|
7
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 8
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 8;
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nlv.pi.dk
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nlv.pi.dk
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8
|
8
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sleep 1; hostname; echo 9
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 9;
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alpha
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nlv.pi.dk
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9
|
9
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sleep 1; hostname; echo 10
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 10;
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alpha
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nlv.pi.dk
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10
|
10
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|
|
53
unittest/wanted-results/test17
Normal file
53
unittest/wanted-results/test17
Normal file
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@ -0,0 +1,53 @@
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|
1
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|
2
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|
3
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|
sleep 1; echo 2
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|
2
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|
sleep 1; echo 1
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|
1
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 3;
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|
3
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sleep 1; echo \>/tmp/fire
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>/tmp/fire
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sleep 1; echo 5
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|
5
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 6;
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6
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sleep 1; echo 7
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|
7
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sleep 1; echo 8
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|
8
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ssh nlv.pi.dk sleep\ 1\;\ echo\ 9;
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|
9
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sleep 1; echo 10
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|
10
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sleep 1; hostname; echo 1
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|
alpha
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|
1
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 2;
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|
nlv.pi.dk
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|
2
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|
ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 3;
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|
nlv.pi.dk
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|
3
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|
ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ \\\>/tmp/fire;
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|
nlv.pi.dk
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|
>/tmp/fire
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 5;
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|
nlv.pi.dk
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|
5
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ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 6;
|
||||||
|
nlv.pi.dk
|
||||||
|
6
|
||||||
|
ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 7;
|
||||||
|
nlv.pi.dk
|
||||||
|
7
|
||||||
|
ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 8;
|
||||||
|
nlv.pi.dk
|
||||||
|
8
|
||||||
|
ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 9;
|
||||||
|
nlv.pi.dk
|
||||||
|
9
|
||||||
|
ssh nlv.pi.dk sleep\ 1\;\ hostname\;\ echo\ 10;
|
||||||
|
nlv.pi.dk
|
||||||
|
10
|
Loading…
Reference in a new issue