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Released as 20180322 ('Hawking')

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This commit is contained in:
Ole Tange 2018-03-22 09:00:48 +01:00
parent 130e299af6
commit 733d882260
11 changed files with 65 additions and 37 deletions
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27
NEWS
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@ -1,4 +1,29 @@
20180122 20180322
* niceload -p can now take multiple pids separated by comma
* --timeout gives a warning when killing processes
* --embed now uses the same code for all supported shells
* --delay can now take arguments like 1h12m07s
* Parallel. Straight from your command line
https://medium.com/@alonisser/parallel-straight-from-your-command-line-feb6db8b6cee
* GNU Parallel was used in POAP-Parallelized Open Babel & Autodock
suite Pipeline https://github.com/inpacdb/POAP
* Pi Cluster Parallel Script First Fire
https://chiefio.wordpress.com/2018/02/23/pi-cluster-parallel-script-first-fire/
* How to Restore MySQL Logical Backup at Maximum Speed
https://www.percona.com/blog/2018/02/22/restore-mysql-logical-backup-maximum-speed/
* Bug fixes and man page updates.
20180222
* --embed makes it possible to embed GNU parallel in a shell * --embed makes it possible to embed GNU parallel in a shell
script. This is useful if you need to distribute your script to script. This is useful if you need to distribute your script to

12
README
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@ -44,9 +44,9 @@ document.
Full installation of GNU Parallel is as simple as: Full installation of GNU Parallel is as simple as:
wget https://ftpmirror.gnu.org/parallel/parallel-20180222.tar.bz2 wget https://ftpmirror.gnu.org/parallel/parallel-20180322.tar.bz2
bzip2 -dc parallel-20180222.tar.bz2 | tar xvf - bzip2 -dc parallel-20180322.tar.bz2 | tar xvf -
cd parallel-20180222 cd parallel-20180322
./configure && make && sudo make install ./configure && make && sudo make install
@ -55,9 +55,9 @@ Full installation of GNU Parallel is as simple as:
If you are not root you can add ~/bin to your path and install in If you are not root you can add ~/bin to your path and install in
~/bin and ~/share: ~/bin and ~/share:
wget https://ftpmirror.gnu.org/parallel/parallel-20180222.tar.bz2 wget https://ftpmirror.gnu.org/parallel/parallel-20180322.tar.bz2
bzip2 -dc parallel-20180222.tar.bz2 | tar xvf - bzip2 -dc parallel-20180322.tar.bz2 | tar xvf -
cd parallel-20180222 cd parallel-20180322
./configure --prefix=$HOME && make && make install ./configure --prefix=$HOME && make && make install
Or if your system lacks 'make' you can simply copy src/parallel Or if your system lacks 'make' you can simply copy src/parallel

20
configure vendored
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@ -1,6 +1,6 @@
#! /bin/sh #! /bin/sh
# Guess values for system-dependent variables and create Makefiles. # Guess values for system-dependent variables and create Makefiles.
# Generated by GNU Autoconf 2.69 for parallel 20180222. # Generated by GNU Autoconf 2.69 for parallel 20180322.
# #
# Report bugs to <bug-parallel@gnu.org>. # Report bugs to <bug-parallel@gnu.org>.
# #
@ -579,8 +579,8 @@ MAKEFLAGS=
# Identity of this package. # Identity of this package.
PACKAGE_NAME='parallel' PACKAGE_NAME='parallel'
PACKAGE_TARNAME='parallel' PACKAGE_TARNAME='parallel'
PACKAGE_VERSION='20180222' PACKAGE_VERSION='20180322'
PACKAGE_STRING='parallel 20180222' PACKAGE_STRING='parallel 20180322'
PACKAGE_BUGREPORT='bug-parallel@gnu.org' PACKAGE_BUGREPORT='bug-parallel@gnu.org'
PACKAGE_URL='' PACKAGE_URL=''
@ -1214,7 +1214,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing. # Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh. # This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF cat <<_ACEOF
\`configure' configures parallel 20180222 to adapt to many kinds of systems. \`configure' configures parallel 20180322 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]... Usage: $0 [OPTION]... [VAR=VALUE]...
@ -1281,7 +1281,7 @@ fi
if test -n "$ac_init_help"; then if test -n "$ac_init_help"; then
case $ac_init_help in case $ac_init_help in
short | recursive ) echo "Configuration of parallel 20180222:";; short | recursive ) echo "Configuration of parallel 20180322:";;
esac esac
cat <<\_ACEOF cat <<\_ACEOF
@ -1357,7 +1357,7 @@ fi
test -n "$ac_init_help" && exit $ac_status test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then if $ac_init_version; then
cat <<\_ACEOF cat <<\_ACEOF
parallel configure 20180222 parallel configure 20180322
generated by GNU Autoconf 2.69 generated by GNU Autoconf 2.69
Copyright (C) 2012 Free Software Foundation, Inc. Copyright (C) 2012 Free Software Foundation, Inc.
@ -1374,7 +1374,7 @@ cat >config.log <<_ACEOF
This file contains any messages produced by compilers while This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake. running configure, to aid debugging if configure makes a mistake.
It was created by parallel $as_me 20180222, which was It was created by parallel $as_me 20180322, which was
generated by GNU Autoconf 2.69. Invocation command line was generated by GNU Autoconf 2.69. Invocation command line was
$ $0 $@ $ $0 $@
@ -2237,7 +2237,7 @@ fi
# Define the identity of the package. # Define the identity of the package.
PACKAGE='parallel' PACKAGE='parallel'
VERSION='20180222' VERSION='20180322'
cat >>confdefs.h <<_ACEOF cat >>confdefs.h <<_ACEOF
@ -2880,7 +2880,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
# report actual input values of CONFIG_FILES etc. instead of their # report actual input values of CONFIG_FILES etc. instead of their
# values after options handling. # values after options handling.
ac_log=" ac_log="
This file was extended by parallel $as_me 20180222, which was This file was extended by parallel $as_me 20180322, which was
generated by GNU Autoconf 2.69. Invocation command line was generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES = $CONFIG_FILES CONFIG_FILES = $CONFIG_FILES
@ -2942,7 +2942,7 @@ _ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`" ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
ac_cs_version="\\ ac_cs_version="\\
parallel config.status 20180222 parallel config.status 20180322
configured by $0, generated by GNU Autoconf 2.69, configured by $0, generated by GNU Autoconf 2.69,
with options \\"\$ac_cs_config\\" with options \\"\$ac_cs_config\\"

2
configure.ac
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@ -1,4 +1,4 @@
AC_INIT([parallel], [20180222], [bug-parallel@gnu.org]) AC_INIT([parallel], [20180322], [bug-parallel@gnu.org])
AM_INIT_AUTOMAKE([-Wall -Werror foreign]) AM_INIT_AUTOMAKE([-Wall -Werror foreign])
AC_CONFIG_HEADERS([config.h]) AC_CONFIG_HEADERS([config.h])
AC_CONFIG_FILES([ AC_CONFIG_FILES([

17
doc/release_new_version
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@ -4,7 +4,6 @@
Check that documentation is updated (compare to web): Check that documentation is updated (compare to web):
Fixet for 20170622
git diff last-release-commit git diff last-release-commit
Unmodified beta since last version => production Unmodified beta since last version => production
Unmodified alpha since last version => beta Unmodified alpha since last version => beta
@ -214,13 +213,21 @@ I don’t know how you have fun.
New in this release: New in this release:
https://medium.com/@alonisser/parallel-straight-from-your-command-line-feb6db8b6cee * niceload -p can now take multiple pids separated by comma
https://github.com/inpacdb/POAP * --timeout gives a warning when killing processes
https://chiefio.wordpress.com/2018/02/23/pi-cluster-parallel-script-first-fire/ * --embed now uses the same code for all supported shells
https://www.percona.com/blog/2018/02/22/restore-mysql-logical-backup-maximum-speed/ * --delay can now take arguments like 1h12m07s
* Parallel. Straight from your command line https://medium.com/@alonisser/parallel-straight-from-your-command-line-feb6db8b6cee
* GNU Parallel was used in POAP-Parallelized Open Babel & Autodock suite Pipeline https://github.com/inpacdb/POAP
* Pi Cluster Parallel Script First Fire https://chiefio.wordpress.com/2018/02/23/pi-cluster-parallel-script-first-fire/
* How to Restore MySQL Logical Backup at Maximum Speed https://www.percona.com/blog/2018/02/22/restore-mysql-logical-backup-maximum-speed/
<<Citation not OK: BAMClipper: removing primers from alignments to minimize false-negative mutations in amplicon next-generation sequencing https://www.nature.com/articles/s41598-017-01703-6>> <<Citation not OK: BAMClipper: removing primers from alignments to minimize false-negative mutations in amplicon next-generation sequencing https://www.nature.com/articles/s41598-017-01703-6>>

14
packager/obs/home:tange/parallel/.osc/_files
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@ -1,10 +1,6 @@
<directory name="parallel" rev="218" srcmd5="af198e4bea2e9de4d6f472745c6eff11" vrev="2"> <directory name="parallel" rev="219" srcmd5="8e477481730832860584d90d05f07a4e" vrev="1">
<entry md5="8b44ef3f5aac2302f976cb58cf61fe87" mtime="1513986752" name="parallel-20171222.tar.bz2" size="1690096" /> <entry md5="a5008cf813dbdad47c853b27d0bcbdc1" mtime="1521705076" name="parallel-20180322.tar.bz2" size="1735502" />
<entry md5="dc3c49472f24afa64146433955e3c60c" mtime="1516637654" name="parallel-20180122.tar.bz2" size="1717898" /> <entry md5="7b5234b018c3639a69d630f93fcdcf08" mtime="1521705076" name="parallel.spec" size="4666" />
<entry md5="f7fc58abc8157639a03fbab6f2fbdecb" mtime="1519335400" name="parallel-20180222.tar.bz2" size="1721015" /> <entry md5="23543f2aefc0a5374fd42520d2791d7a" mtime="1521705076" name="parallel_20180322.dsc" size="556" />
<entry md5="b985be62051b5e1c35ccf0f9a9f54ed0" mtime="1519335400" name="parallel.spec" size="4666" /> <entry md5="54be6b9fcd4a8eeb653a968b78e354d1" mtime="1521705076" name="parallel_20180322.tar.gz" size="1938931" />
<entry md5="21420e5e8a3c415584438286cb2cdcaf" mtime="1513986753" name="parallel_20171222.tar.gz" size="1894418" />
<entry md5="cd809eb297ee7fb8821786b6a814090c" mtime="1516637670" name="parallel_20180122.tar.gz" size="1904981" />
<entry md5="577f63e016ab75cd653129c801a53fc5" mtime="1519335400" name="parallel_20180222.dsc" size="556" />
<entry md5="73d175bc25fbbef5459d2a9d2246c8f4" mtime="1519335400" name="parallel_20180222.tar.gz" size="1924236" />
</directory> </directory>

2
packager/obs/home:tange/parallel/.osc/parallel.spec
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@ -1,6 +1,6 @@
Summary: Shell tool for executing jobs in parallel Summary: Shell tool for executing jobs in parallel
Name: parallel Name: parallel
Version: 20180222 Version: 20180322
Release: 1.2 Release: 1.2
License: GPL License: GPL
Group: Productivity/File utilities Group: Productivity/File utilities

2
packager/obs/home:tange/parallel/parallel.spec
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@ -1,6 +1,6 @@
Summary: Shell tool for executing jobs in parallel Summary: Shell tool for executing jobs in parallel
Name: parallel Name: parallel
Version: 20180222 Version: 20180322
Release: 1.2 Release: 1.2
License: GPL License: GPL
Group: Productivity/File utilities Group: Productivity/File utilities

2
src/niceload
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@ -24,7 +24,7 @@
use strict; use strict;
use Getopt::Long; use Getopt::Long;
$Global::progname="niceload"; $Global::progname="niceload";
$Global::version = 20180223; $Global::version = 20180322;
Getopt::Long::Configure("bundling","require_order"); Getopt::Long::Configure("bundling","require_order");
get_options_from_array(\@ARGV) || die_usage(); get_options_from_array(\@ARGV) || die_usage();
if($opt::version) { if($opt::version) {

2
src/parallel
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@ -1417,7 +1417,7 @@ sub check_invalid_option_combinations {
sub init_globals { sub init_globals {
# Defaults: # Defaults:
$Global::version = 20180223; $Global::version = 20180322;
$Global::progname = 'parallel'; $Global::progname = 'parallel';
$Global::infinity = 2**31; $Global::infinity = 2**31;
$Global::debug = 0; $Global::debug = 0;

2
src/sql
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@ -576,7 +576,7 @@ $Global::Initfile && unlink $Global::Initfile;
exit ($err); exit ($err);
sub parse_options { sub parse_options {
$Global::version = 20180223; $Global::version = 20180322;
$Global::progname = 'sql'; $Global::progname = 'sql';
# This must be done first as this may exec myself # This must be done first as this may exec myself