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testsuite bug #39572: --tty and --joblog do not work.

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Passes local testsuite.
This commit is contained in:
Ole Tange 2013-07-30 21:21:08 +02:00
parent 5b16a482e4
commit 88540d06a7
6 changed files with 31 additions and 33 deletions
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38
doc/release_new_version
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@ -198,45 +198,33 @@ cc:Sandro Cazzaniga <kharec@mandriva.org>,
Ryoichiro Suzuki <ryoichiro.suzuki@gmail.com>, Ryoichiro Suzuki <ryoichiro.suzuki@gmail.com>,
Jesse Alama <jesse.alama@gmail.com> Jesse Alama <jesse.alama@gmail.com>
Subject: GNU Parallel 20130722 ('Engelbart') released Subject: GNU Parallel 20130822 ('Compostela') released
GNU Parallel 20130722 ('Engelbart') has been released. It is GNU Parallel 20130822 ('Compostela') has been released. It is
available for download at: http://ftp.gnu.org/gnu/parallel/ available for download at: http://ftp.gnu.org/gnu/parallel/
New in this release: New in this release:
* --round-robin with --pipe will write all blocks to already running
jobs.
* --env can now transfer Bash function for remote execution. That is
pretty cool!
* New signing key. Due to recommendations from NIST * New signing key. Due to recommendations from NIST
http://www.keylength.com/en/4/ the signing key was changed from http://www.keylength.com/en/4/ the signing key was changed from
1024D/4000g/ID:FFFFFFF1 to 9888R/ID:88888888. 1024D/4000g/ID:FFFFFFF1 to 9888R/ID:88888888.
* GNU Parallel was used (unfortunately with improper citation) in: * Agalma: an automated phylogenomics workflow
Understanding the Impact of E-Commerce Software on the Adoption of Structured Data on the Web http://arxiv.org/pdf/1307.6432
http://link.springer.com/chapter/10.1007/978-3-642-38366-3_9#page-1
* GNU Parallel was used (unfortunately with improper citation) in: * Aligning to unique regions
CWI at TREC 2012, KBA track and Session Track http://davetang.org/muse/2013/07/22/aligning-to-unique-regions/
http://trec.nist.gov/pubs/trec21/papers/CWI.kba.session.final.pdf
* Mitigation of Adverse Effects Caused by Shock Wave Boundary Layer * Top 10 scripting tricks for basic bioinformatics
Interactions through Optimal Wall Shaping. http://students.washington.edu/bowmanjs/wordpress/?p=873
http://arc.aiaa.org/doi/abs/10.2514/6.2013-2653
* Using GNU parallel to convert images. * Using GNU Parallel to speed up and simplify data analyzes
http://www.brunokim.com.br/blog/?p=18 http://www.sergeymarkov.com/blog/2013/07/using-gnu-parallel-to-speed-up-and-simplify-data-analyzes/
* A quick way to parallelize. * Compression of files in parallel using GNU parallel
http://timotheepoisot.fr/2013/07/08/parallel/ http://codextechnicanum.blogspot.dk/2013/07/compression-of-files-in-parallel-using.html
* GNU Parallel 20130522 ('Rana Plaza') 发布，并行作业执行. * Bug fixes and man page updates.
http://www.open-open.com/news/view/371301
* Quite a few bug fixes and man page updates.
= About GNU Parallel = = About GNU Parallel =

12
src/parallel
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@ -448,7 +448,7 @@ sub spreadstdin {
} }
} }
if($something_written) { if($something_written) {
$sleep = $sleep/2; $sleep = $sleep/2+0.001;
} }
$sleep = ::reap_usleep($sleep); $sleep = ::reap_usleep($sleep);
} }
@ -523,7 +523,7 @@ sub write_record_to_pipe {
substr($$record_ref,$endpos,length $$record_ref) = ""; substr($$record_ref,$endpos,length $$record_ref) = "";
# Remove rec_sep # Remove rec_sep
if($opt::remove_rec_sep) { if($opt::remove_rec_sep) {
remove_rec_sep($record_ref,$recstart,$recend); Job::remove_rec_sep($record_ref,$recstart,$recend);
} }
$job->write($header_ref); $job->write($header_ref);
$job->write($record_ref); $job->write($record_ref);
@ -727,7 +727,7 @@ sub get_options_from_array {
sub parse_options { sub parse_options {
# Returns: N/A # Returns: N/A
# Defaults: # Defaults:
$Global::version = 20130722; $Global::version = 20130730;
$Global::progname = 'parallel'; $Global::progname = 'parallel';
$Global::infinity = 2**31; $Global::infinity = 2**31;
$Global::debug = 0; $Global::debug = 0;
@ -1547,7 +1547,7 @@ sub drain_job_queue {
# These jobs may not be started because of loadavg # These jobs may not be started because of loadavg
# or too little time between each ssh login. # or too little time between each ssh login.
if(start_more_jobs() > 0) { if(start_more_jobs() > 0) {
$sleep = $sleep/2; $sleep = $sleep/2+0.001;
} }
} }
# Sometimes SIGCHLD is not registered, so force reaper # Sometimes SIGCHLD is not registered, so force reaper
@ -4482,7 +4482,7 @@ sub print {
my $in_fd = $self->fd($fdno); my $in_fd = $self->fd($fdno);
if(not $in_fd) { if(not $in_fd) {
if(not $Job::file_descriptor_warning_printed{$fdno}++) { if(not $Job::file_descriptor_warning_printed{$fdno}++) {
::warning("File descriptor $fdno not defined\n"); # ::warning("File descriptor $fdno not defined\n");
} }
next; next;
} }
@ -6062,5 +6062,5 @@ sub mkdir_or_die {
# Keep perl -w happy # Keep perl -w happy
$opt::x = $Semaphore::timeout = $Semaphore::wait = $opt::shebang = $Global::no_more_file_handles_warned = $opt::x = $Semaphore::timeout = $Semaphore::wait = $opt::shebang = $Global::no_more_file_handles_warned =
0; $Job::file_descriptor_warning_printed = 0;

2
src/sql.texi
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@ -329,7 +329,7 @@ Use GNU @strong{parallel}'s @strong{--colsep} to separate columns:
@section Retry if the connection fails @section Retry if the connection fails
@anchor{Retry if the connection fails} @anchor{Retry if the connection fails}
If the access to the database fails occationally @strong{--retries} can help If the access to the database fails occasionally @strong{--retries} can help
make sure the query succeeds: make sure the query succeeds:
@strong{sql --retries 5 :myalias 'SELECT * FROM really_big_foo;'} @strong{sql --retries 5 :myalias 'SELECT * FROM really_big_foo;'}

3
testsuite/tests-to-run/parallel-local4.sh
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@ -22,6 +22,9 @@ echo '### -l -n with pipe'
echo '### bug #39360: --joblog does not work with --pipe' echo '### bug #39360: --joblog does not work with --pipe'
seq 100 | parallel --joblog - --pipe wc | tr '0-9' 'X' seq 100 | parallel --joblog - --pipe wc | tr '0-9' 'X'
echo '### bug #39572: --tty and --joblog do not work'
seq 1 | parallel --joblog - -u true | tr '0-9' 'X'
echo '### How do we deal with missing $HOME' echo '### How do we deal with missing $HOME'
unset HOME; stdout perl -w $(which parallel) echo ::: 1 2 3 unset HOME; stdout perl -w $(which parallel) echo ::: 1 2 3

5
testsuite/wanted-results/parallel-local4
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@ -93,6 +93,11 @@ echo '### bug #39360: --joblog does not work with --pipe'
Seq Host Starttime Runtime Send Receive Exitval Signal Command Seq Host Starttime Runtime Send Receive Exitval Signal Command
X : XXXXXXXXXX.XXX X.XXX X X X X wc X : XXXXXXXXXX.XXX X.XXX X X X X wc
XXX XXX XXX XXX XXX XXX
echo '### bug #39572: --tty and --joblog do not work'
### bug #39572: --tty and --joblog do not work
seq 1 | parallel --joblog - -u true | tr '0-9' 'X'
Seq Host Starttime Runtime Send Receive Exitval Signal Command
X : XXXXXXXXXX.XXX X.XXX X X X X true X
echo '### How do we deal with missing $HOME' echo '### How do we deal with missing $HOME'
### How do we deal with missing $HOME ### How do we deal with missing $HOME
unset HOME; stdout perl -w $(which parallel) echo ::: 1 2 3 unset HOME; stdout perl -w $(which parallel) echo ::: 1 2 3

4
testsuite/wanted-results/parallel-polarhome
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@ -33,7 +33,7 @@ redhat.polarhome.com Works on redhat.polarhome.com
hpux.polarhome.com Works on hpux.polarhome.com hpux.polarhome.com Works on hpux.polarhome.com
qnx.polarhome.com Works on qnx.polarhome.com qnx.polarhome.com Works on qnx.polarhome.com
qnx.polarhome.com parallel: Warning: Cannot figure out number of CPU cores. Using 1. qnx.polarhome.com parallel: Warning: Cannot figure out number of CPU cores. Using 1.
irix.polarhome.com Unknown open() mode '>&=' at bin/parallel line 1316. irix.polarhome.com Unknown open() mode '>&=' at bin/parallel line 1318.
openindiana.polarhome.com Works on openindiana.polarhome.com openindiana.polarhome.com Works on openindiana.polarhome.com
openindiana.polarhome.com parallel: Warning: Cannot figure out number of CPU cores. Using 1. openindiana.polarhome.com parallel: Warning: Cannot figure out number of CPU cores. Using 1.
suse.polarhome.com Works on suse.polarhome.com suse.polarhome.com Works on suse.polarhome.com
@ -46,3 +46,5 @@ centos.polarhome.com Works on centos.polarhome.com
miros.polarhome.com Works on miros.polarhome.com miros.polarhome.com Works on miros.polarhome.com
hurd.polarhome.com Works on hurd.polarhome.com hurd.polarhome.com Works on hurd.polarhome.com
minix.polarhome.com Works on minix.polarhome.com minix.polarhome.com Works on minix.polarhome.com
raspberrypi.polarhome.com Works on raspberrypi.polarhome.com
raspberrypi.polarhome.com parallel: Warning: Cannot figure out number of CPU cores. Using 1.