mirror of
https://git.savannah.gnu.org/git/parallel.git
synced 2024-11-21 21:47:54 +00:00
Released as 20140722 ('MH17').
This commit is contained in:
Ole Tange
parent
546f5aea03
commit
9bb46c6ed6
67
NEWS
67
NEWS
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@ -1,3 +1,70 @@
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20140722
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* {= perl expression =} can be used as replacement string. The
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expression should modify $_. E.g. {= s/\.gz$// =} to remove .gz from
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the string. This makes replacement strings extremely flexible.
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* Positional perl expressions (similar to {2}) are given as {=2 perl
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expression=} where 2 is the position.
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* One small backwards incompatability: {1}_{2} will replace {2} with
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the empty string if there is only one argument. Previously {2} would
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have been left untouched.
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* Replacement strings can be defined using --rpl. E.g. parallel --rpl
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'{.gz} s/\.gz$//' echo {.gz} ::: *.gz
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* The parenthesis around {= perl expression =} can be changed with
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--parens.
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* --tmux will direct the output to a tmux session instead of
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files. Each running jobs will be in its own window.
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* --halt 10% will stop spawning new jobs if 10% failed so far.
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* GNU Parallel was cited in: bammds: A tool for assessing the ancestry
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of low depth whole genome data using multidimensional scaling (MDS)
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http://bioinformatics.oxfordjournals.org/content/early/2014/06/28/bioinformatics.btu410.abstract
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* GNU Parallel was cited in: Molecular ferroelectric contributions to
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anomalous hysteresis in hybrid perovskite solar cells
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http://people.bath.ac.uk/aw558/publications/2014/arxiv_hysteresis_14.pdf
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* GNU Parallel was cited in: Energy Sorghum-a genetic model for the
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design of C4 grass bioenergy crops
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http://jxb.oxfordjournals.org/content/early/2014/06/20/jxb.eru229.short
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* GNU Parallel was cited in: Web-scale Content Reuse Detection
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www.isi.edu/~johnh/PAPERS/Ardi14a.pdf
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* Tell your friends to sign up for the Webcast at 2014-08-20 covering
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GNU Parallel: Data Science at the Command Line
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http://www.oreilly.com/pub/e/3115
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* GNU Parallel all the things!
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http://longwayaround.org.uk/notes/gnu-parallel-all-the-things/
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* Shell command composition and dispatch
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http://lukeluo.blogspot.dk/2014/07/linux-virtual-console6-shell-command.html
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* Parallelising plink (or anything else) the easy way
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http://chrisladroue.com/2012/03/parallelising-plink-or-anything-else-the-easy-way/
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* Easy and cheap cluster building on AWS
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https://grapeot.me/easy-and-cheap-cluster-building-on-aws.html
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* Paralelizace běžných činností v konzoli pomocí GNU Parallel
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http://www.abclinuxu.cz/clanky/paralelizace-beznych-cinnosti-v-konzoli-pomoci-gnu-parallel
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* [原] Ubuntu 下使用 parallel 命令的注意事项
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http://blog.ailms.me/2014/06/28/ubuntu-with-parallel.html
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* 简单的并行, 可使用GNU parallel
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http://jerkwin.github.io/2014/06/10/GNU-parallel/
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* Bug fixes and man page updates.
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20140622
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* --shebang and --shebang-wrap now works on FreeBSD.
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12
README
12
README
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@ -40,9 +40,9 @@ document.
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Full installation of GNU Parallel is as simple as:
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wget http://ftpmirror.gnu.org/parallel/parallel-20140711.tar.bz2
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bzip2 -dc parallel-20140711.tar.bz2 | tar xvf -
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cd parallel-20140711
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wget http://ftpmirror.gnu.org/parallel/parallel-20140722.tar.bz2
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bzip2 -dc parallel-20140722.tar.bz2 | tar xvf -
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cd parallel-20140722
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./configure && make && make install
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@ -51,9 +51,9 @@ Full installation of GNU Parallel is as simple as:
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If you are not root you can add ~/bin to your path and install in
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~/bin and ~/share:
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wget http://ftpmirror.gnu.org/parallel/parallel-20140711.tar.bz2
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bzip2 -dc parallel-20140711.tar.bz2 | tar xvf -
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cd parallel-20140711
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wget http://ftpmirror.gnu.org/parallel/parallel-20140722.tar.bz2
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bzip2 -dc parallel-20140722.tar.bz2 | tar xvf -
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cd parallel-20140722
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./configure --prefix=$HOME && make && make install
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Or if your system lacks 'make' you can simply copy src/parallel
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20
configure
vendored
20
configure
vendored
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@ -1,6 +1,6 @@
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#! /bin/sh
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# Guess values for system-dependent variables and create Makefiles.
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# Generated by GNU Autoconf 2.69 for parallel 20140711.
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# Generated by GNU Autoconf 2.69 for parallel 20140722.
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#
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# Report bugs to <bug-parallel@gnu.org>.
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#
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@ -579,8 +579,8 @@ MAKEFLAGS=
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# Identity of this package.
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PACKAGE_NAME='parallel'
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PACKAGE_TARNAME='parallel'
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PACKAGE_VERSION='20140711'
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PACKAGE_STRING='parallel 20140711'
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PACKAGE_VERSION='20140722'
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PACKAGE_STRING='parallel 20140722'
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PACKAGE_BUGREPORT='bug-parallel@gnu.org'
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PACKAGE_URL=''
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@ -1197,7 +1197,7 @@ if test "$ac_init_help" = "long"; then
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# Omit some internal or obsolete options to make the list less imposing.
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# This message is too long to be a string in the A/UX 3.1 sh.
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cat <<_ACEOF
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\`configure' configures parallel 20140711 to adapt to many kinds of systems.
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\`configure' configures parallel 20140722 to adapt to many kinds of systems.
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Usage: $0 [OPTION]... [VAR=VALUE]...
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@ -1263,7 +1263,7 @@ fi
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if test -n "$ac_init_help"; then
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case $ac_init_help in
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short | recursive ) echo "Configuration of parallel 20140711:";;
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short | recursive ) echo "Configuration of parallel 20140722:";;
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esac
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cat <<\_ACEOF
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@ -1337,7 +1337,7 @@ fi
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test -n "$ac_init_help" && exit $ac_status
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if $ac_init_version; then
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cat <<\_ACEOF
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parallel configure 20140711
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parallel configure 20140722
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generated by GNU Autoconf 2.69
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Copyright (C) 2012 Free Software Foundation, Inc.
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@ -1354,7 +1354,7 @@ cat >config.log <<_ACEOF
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This file contains any messages produced by compilers while
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running configure, to aid debugging if configure makes a mistake.
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It was created by parallel $as_me 20140711, which was
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It was created by parallel $as_me 20140722, which was
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generated by GNU Autoconf 2.69. Invocation command line was
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$ $0 $@
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@ -2169,7 +2169,7 @@ fi
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# Define the identity of the package.
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PACKAGE='parallel'
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VERSION='20140711'
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VERSION='20140722'
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cat >>confdefs.h <<_ACEOF
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@ -2741,7 +2741,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
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# report actual input values of CONFIG_FILES etc. instead of their
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# values after options handling.
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ac_log="
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This file was extended by parallel $as_me 20140711, which was
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This file was extended by parallel $as_me 20140722, which was
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generated by GNU Autoconf 2.69. Invocation command line was
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CONFIG_FILES = $CONFIG_FILES
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@ -2803,7 +2803,7 @@ _ACEOF
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cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
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ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
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ac_cs_version="\\
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parallel config.status 20140711
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parallel config.status 20140722
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configured by $0, generated by GNU Autoconf 2.69,
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with options \\"\$ac_cs_config\\"
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@ -1,4 +1,4 @@
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AC_INIT([parallel], [20140711], [bug-parallel@gnu.org])
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AC_INIT([parallel], [20140722], [bug-parallel@gnu.org])
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AM_INIT_AUTOMAKE([-Wall -Werror foreign])
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AC_CONFIG_HEADERS([config.h])
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AC_CONFIG_FILES([
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@ -245,6 +245,8 @@ New in this release:
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* --tmux will direct the output to a tmux session instead of files. Each running jobs will be in its own window.
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* --halt 10% will stop spawning new jobs if 10% failed so far.
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* GNU Parallel was cited in: bammds: A tool for assessing the ancestry of low depth whole genome data using multidimensional scaling (MDS) http://bioinformatics.oxfordjournals.org/content/early/2014/06/28/bioinformatics.btu410.abstract
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* GNU Parallel was cited in: Molecular ferroelectric contributions to anomalous hysteresis in hybrid perovskite solar cells http://people.bath.ac.uk/aw558/publications/2014/arxiv_hysteresis_14.pdf
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@ -1,6 +1,6 @@
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Summary: Shell tool for executing jobs in parallel
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Name: parallel
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Version: 20140622
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Version: 20140722
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Release: 1
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License: GPL
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Group: Productivity/File utilities
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@ -24,7 +24,7 @@
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use strict;
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use Getopt::Long;
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$Global::progname="niceload";
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$Global::version = 20140711;
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$Global::version = 20140722;
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Getopt::Long::Configure("bundling","require_order");
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get_options_from_array(\@ARGV) || die_usage();
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if($opt::version) {
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15
src/parallel
15
src/parallel
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@ -720,7 +720,7 @@ sub get_options_from_array {
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sub parse_options {
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# Returns: N/A
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# Defaults:
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$Global::version = 20140719;
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$Global::version = 20140722;
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$Global::progname = 'parallel';
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$Global::infinity = 2**31;
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$Global::debug = 0;
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@ -5279,7 +5279,6 @@ sub start {
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# The eval is needed to catch exception from open3
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if($opt::tmux) {
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$command = $job->tmux_wrap($command);
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# $command = tmux_wrap($command,$job->replaced());
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}
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eval {
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$pid = ::open3("<&IN", ">&OUT", ">&ERR", $ENV{SHELL}, "-c", $command) ||
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@ -5296,7 +5295,6 @@ sub start {
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# The eval is needed to catch exception from open3
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if($opt::tmux) {
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$command = $job->tmux_wrap($command);
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# $command = tmux_wrap($command,$job->replaced());
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}
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eval {
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$pid = ::open3("<&IN", ">&OUT", ">&ERR", $ENV{SHELL}, "-c", $command) ||
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@ -5308,7 +5306,6 @@ sub start {
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} else {
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if($opt::tmux) {
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$command = $job->tmux_wrap($command);
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# $command = tmux_wrap($command,$job->replaced());
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}
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eval {
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$pid = ::open3(::gensym, ">&OUT", ">&ERR", $ENV{SHELL}, "-c", $command) ||
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@ -5348,20 +5345,18 @@ sub tmux_wrap {
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close $fh;
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unlink $tmpfile;
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my $visual_command = $self->replaced();
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my $c = ::undef_as_empty($self->{'commandline'}->replace_placeholders(["\257<\257>"],0,0))."";
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my $title = ::undef_as_empty($self->{'commandline'}->replace_placeholders(["\257<\257>"],0,0))."";
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# ascii 194-224 annoys tmux
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$c =~ s/[\011-\016;\302-\340]//g;
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$title =~ s/[\011-\016;\302-\340]//g;
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my $tmux;
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if($Global::total_running == 0) {
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$tmux = "tmux new-session -s p$$ -d -n ".
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::shell_quote_scalar($c);
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::shell_quote_scalar($title);
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print $Global::original_stderr "See output with: tmux attach -t p$$\n";
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} else {
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$tmux = "tmux new-window -t p$$ -n ".::shell_quote_scalar($c);
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$tmux = "tmux new-window -t p$$ -n ".::shell_quote_scalar($title);
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}
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# $tmux = "tmux new-session -s p$$ -d true >/dev/null; ".
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# "tmux new-window -t p$$ -n ".::shell_quote_scalar($c);
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return "mkfifo $tmpfile; $tmux ".
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# Run in tmux
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::shell_quote_scalar("(".$actual_command.');(echo $?$status;echo 255) >'.$tmpfile.";".
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@ -244,7 +244,7 @@ directory (if any) and extension removed.
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To understand positional replacement strings see B<{>I<n>B<}>.
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=item B<{=>I<perl expression>B<=}>
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=item B<{=>I<perl expression>B<=}> (alpha testing)
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Replace with calculated I<perl expression>. B<$_> will contain the
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same as B<{}>. After evaluating I<perl expression> B<$_> will be used
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@ -257,7 +257,7 @@ The B<{=>I<perl expression>B<=}> must be given as a single string.
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See also: B<--rpl> B<--parens>
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=item B<{=>I<n> I<perl expression>B<=}>
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=item B<{=>I<n> I<perl expression>B<=}> (alpha testing)
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Positional equivalent to B<{= perl expression =}>. To understand
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positional replacement strings see B<{>I<n>B<}>.
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@ -323,8 +323,8 @@ directory (if any) and extension removed.
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To understand positional replacement strings see @strong{@{}@emph{n}@strong{@}}.
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@item @strong{@{=}@emph{perl expression}@strong{=@}}
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@anchor{@strong{@{=}@emph{perl expression}@strong{=@}}}
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@item @strong{@{=}@emph{perl expression}@strong{=@}} (alpha testing)
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@anchor{@strong{@{=}@emph{perl expression}@strong{=@}} (alpha testing)}
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Replace with calculated @emph{perl expression}. @strong{$_} will contain the
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same as @strong{@{@}}. After evaluating @emph{perl expression} @strong{$_} will be used
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@ -336,8 +336,8 @@ The @strong{@{=}@emph{perl expression}@strong{=@}} must be given as a single str
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See also: @strong{--rpl} @strong{--parens}
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@item @strong{@{=}@emph{n} @emph{perl expression}@strong{=@}}
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@anchor{@strong{@{=}@emph{n} @emph{perl expression}@strong{=@}}}
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@item @strong{@{=}@emph{n} @emph{perl expression}@strong{=@}} (alpha testing)
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@anchor{@strong{@{=}@emph{n} @emph{perl expression}@strong{=@}} (alpha testing)}
|
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Positional equivalent to @strong{@{= perl expression =@}}. To understand
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positional replacement strings see @strong{@{}@emph{n}@strong{@}}.
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|
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2
src/sql
2
src/sql
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@ -566,7 +566,7 @@ $Global::Initfile && unlink $Global::Initfile;
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exit ($err);
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sub parse_options {
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$Global::version = 20140711;
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$Global::version = 20140722;
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$Global::progname = 'sql';
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||||
# This must be done first as this may exec myself
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|
|
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BIN
src/sql.pdf
BIN
src/sql.pdf
Binary file not shown.
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@ -57,4 +57,7 @@ echo '### bug #42055: --pipe -a bigfile should not require sequential reading of
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parallel --pipepart -a /etc/passwd -N 1 should not be run
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parallel --pipepart -a /etc/passwd -l 1 should not be run
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|
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echo '### --tmux test - check termination'
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perl -e 'map {printf "$_%o%c\n",$_,$_}1..255' | parallel --tmux echo {} :::: - ::: a b
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||||
EOF
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|
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@ -5,6 +5,26 @@ test -d "parallel-00000000" || mkdir "parallel-00000000"
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(cd src && make top_distdir=../parallel-00000000 distdir=../parallel-00000000/src \
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am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
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make[0]: Entering directory `/home/tange/privat/parallel/src'
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pod2man --release='00000000' --center='parallel' \
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--section=1 ./parallel.pod > ./parallel.1n \
|
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&& mv ./parallel.1n ./parallel.1 \
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|| echo "Warning: pod2man not found. Using old parallel.1"
|
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/bin/bash: pod2man: command not found
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Warning: pod2man not found. Using old parallel.1
|
||||
pod2html ./parallel.pod > ./parallel.htmln \
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&& mv ./parallel.htmln ./parallel.html \
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|| echo "Warning: pod2html not found. Using old parallel.html"
|
||||
/bin/bash: pod2html: command not found
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Warning: pod2html not found. Using old parallel.html
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rm -f ./pod2htm*
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pod2texi --output=./parallel.texi ./parallel.pod \
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|| echo "Warning: pod2texi not found. Using old parallel.texi"
|
||||
/bin/bash: pod2texi: command not found
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||||
Warning: pod2texi not found. Using old parallel.texi
|
||||
pod2pdf --output-file ./parallel.pdf ./parallel.pod --title "GNU Parallel" \
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||||
|| echo "Warning: pod2pdf not found. Using old parallel.pdf"
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/bin/bash: pod2pdf: command not found
|
||||
Warning: pod2pdf not found. Using old parallel.pdf
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||||
make[0]: Leaving directory `/home/tange/privat/parallel/src'
|
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test -n "" \
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|| find "parallel-00000000" -type d ! -perm -755 \
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|
|
|
|||
0
testsuite/wanted-results/parallel-local-10s
Normal file
0
testsuite/wanted-results/parallel-local-10s
Normal file
|
|
@ -73,3 +73,7 @@ parallel: Error: --pipepart is incompatible with --max-replace-args, --max-lines
|
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parallel: Error: --pipepart is incompatible with --max-replace-args, --max-lines, and -L.
|
||||
parallel --pipepart -a /etc/passwd -l 1 should not be run
|
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parallel: Error: --pipepart is incompatible with --max-replace-args, --max-lines, and -L.
|
||||
echo '### --tmux test - check termination'
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### --tmux test - check termination
|
||||
perl -e 'map {printf "$_%o%c\n",$_,$_}1..255' | parallel --tmux echo {} :::: - ::: a b
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||||
See output with: tmux attach -t p6522
|
||||
|
|
|
|||
Loading…
Reference in a new issue