diff --git a/Makefile.in b/Makefile.in index a1ca523a..09cba522 100644 --- a/Makefile.in +++ b/Makefile.in @@ -1,7 +1,7 @@ -# Makefile.in generated by automake 1.15 from Makefile.am. +# Makefile.in generated by automake 1.15.1 from Makefile.am. # @configure_input@ -# Copyright (C) 1994-2014 Free Software Foundation, Inc. +# Copyright (C) 1994-2017 Free Software Foundation, Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -500,7 +500,7 @@ distdir: $(DISTFILES) ! -type d ! -perm -444 -exec $(install_sh) -c -m a+r {} {} \; \ || chmod -R a+r "$(distdir)" dist-gzip: distdir - tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz + tardir=$(distdir) && $(am__tar) | eval GZIP= gzip $(GZIP_ENV) -c >$(distdir).tar.gz $(am__post_remove_distdir) dist-bzip2: distdir @@ -526,7 +526,7 @@ dist-shar: distdir @echo WARNING: "Support for shar distribution archives is" \ "deprecated." >&2 @echo WARNING: "It will be removed altogether in Automake 2.0" >&2 - shar $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).shar.gz + shar $(distdir) | eval GZIP= gzip $(GZIP_ENV) -c >$(distdir).shar.gz $(am__post_remove_distdir) dist-zip: distdir @@ -544,7 +544,7 @@ dist dist-all: distcheck: dist case '$(DIST_ARCHIVES)' in \ *.tar.gz*) \ - GZIP=$(GZIP_ENV) gzip -dc $(distdir).tar.gz | $(am__untar) ;;\ + eval GZIP= gzip $(GZIP_ENV) -dc $(distdir).tar.gz | $(am__untar) ;;\ *.tar.bz2*) \ bzip2 -dc $(distdir).tar.bz2 | $(am__untar) ;;\ *.tar.lz*) \ @@ -554,7 +554,7 @@ distcheck: dist *.tar.Z*) \ uncompress -c $(distdir).tar.Z | $(am__untar) ;;\ *.shar.gz*) \ - GZIP=$(GZIP_ENV) gzip -dc $(distdir).shar.gz | unshar ;;\ + eval GZIP= gzip $(GZIP_ENV) -dc $(distdir).shar.gz | unshar ;;\ *.zip*) \ unzip $(distdir).zip ;;\ esac diff --git a/NEWS b/NEWS index ef4c361f..810ddb2d 100644 --- a/NEWS +++ b/NEWS @@ -1,3 +1,21 @@ +20181022 + +* env_parallel.fish: --session support (alpha quality) + +* GNU Parallel was cited in: High-throughput sequencing of murine + immunoglobulin heavy chain repertoires using single side unique + molecular identifiers on an Ion Torrent PGM + https://doi.org/10.18632/oncotarget.25493 + +* GNU parallel in Japanese Wikipedia + https://ja.wikipedia.org/wiki/GNU_parallel + +* Outils de paramétrisation des tâches: lots de tâches, GNU Parallel + https://www.eventbrite.ca/e/inscription-outils-de-parametrisation-des-taches-lots-de-taches-gnu-parallel-et-bqtools-midi-conference-de-50271076142 + +* Bug fixes and man page updates. + + 20180922 * Minix is supported again. diff --git a/README b/README index 9f89b4ca..13fea9f5 100644 --- a/README +++ b/README @@ -44,9 +44,9 @@ document. Full installation of GNU Parallel is as simple as: - wget https://ftpmirror.gnu.org/parallel/parallel-20180922.tar.bz2 - bzip2 -dc parallel-20180922.tar.bz2 | tar xvf - - cd parallel-20180922 + wget https://ftpmirror.gnu.org/parallel/parallel-20181022.tar.bz2 + bzip2 -dc parallel-20181022.tar.bz2 | tar xvf - + cd parallel-20181022 ./configure && make && sudo make install @@ -55,9 +55,9 @@ Full installation of GNU Parallel is as simple as: If you are not root you can add ~/bin to your path and install in ~/bin and ~/share: - wget https://ftpmirror.gnu.org/parallel/parallel-20180922.tar.bz2 - bzip2 -dc parallel-20180922.tar.bz2 | tar xvf - - cd parallel-20180922 + wget https://ftpmirror.gnu.org/parallel/parallel-20181022.tar.bz2 + bzip2 -dc parallel-20181022.tar.bz2 | tar xvf - + cd parallel-20181022 ./configure --prefix=$HOME && make && make install Or if your system lacks 'make' you can simply copy src/parallel diff --git a/aclocal.m4 b/aclocal.m4 index c24039fe..22dd4fca 100644 --- a/aclocal.m4 +++ b/aclocal.m4 @@ -1,6 +1,6 @@ -# generated automatically by aclocal 1.15 -*- Autoconf -*- +# generated automatically by aclocal 1.15.1 -*- Autoconf -*- -# Copyright (C) 1996-2014 Free Software Foundation, Inc. +# Copyright (C) 1996-2017 Free Software Foundation, Inc. # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -20,7 +20,7 @@ You have another version of autoconf. It may work, but is not guaranteed to. If you have problems, you may need to regenerate the build system entirely. To do so, use the procedure documented by the package, typically 'autoreconf'.])]) -# Copyright (C) 2002-2014 Free Software Foundation, Inc. +# Copyright (C) 2002-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -35,7 +35,7 @@ AC_DEFUN([AM_AUTOMAKE_VERSION], [am__api_version='1.15' dnl Some users find AM_AUTOMAKE_VERSION and mistake it for a way to dnl require some minimum version. Point them to the right macro. -m4_if([$1], [1.15], [], +m4_if([$1], [1.15.1], [], [AC_FATAL([Do not call $0, use AM_INIT_AUTOMAKE([$1]).])])dnl ]) @@ -51,14 +51,14 @@ m4_define([_AM_AUTOCONF_VERSION], []) # Call AM_AUTOMAKE_VERSION and AM_AUTOMAKE_VERSION so they can be traced. # This function is AC_REQUIREd by AM_INIT_AUTOMAKE. AC_DEFUN([AM_SET_CURRENT_AUTOMAKE_VERSION], -[AM_AUTOMAKE_VERSION([1.15])dnl +[AM_AUTOMAKE_VERSION([1.15.1])dnl m4_ifndef([AC_AUTOCONF_VERSION], [m4_copy([m4_PACKAGE_VERSION], [AC_AUTOCONF_VERSION])])dnl _AM_AUTOCONF_VERSION(m4_defn([AC_AUTOCONF_VERSION]))]) # AM_AUX_DIR_EXPAND -*- Autoconf -*- -# Copyright (C) 2001-2014 Free Software Foundation, Inc. +# Copyright (C) 2001-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -110,7 +110,7 @@ am_aux_dir=`cd "$ac_aux_dir" && pwd` # AM_CONDITIONAL -*- Autoconf -*- -# Copyright (C) 1997-2014 Free Software Foundation, Inc. +# Copyright (C) 1997-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -143,7 +143,7 @@ fi])]) # Do all the work for Automake. -*- Autoconf -*- -# Copyright (C) 1996-2014 Free Software Foundation, Inc. +# Copyright (C) 1996-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -340,7 +340,7 @@ for _am_header in $config_headers :; do done echo "timestamp for $_am_arg" >`AS_DIRNAME(["$_am_arg"])`/stamp-h[]$_am_stamp_count]) -# Copyright (C) 2001-2014 Free Software Foundation, Inc. +# Copyright (C) 2001-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -361,7 +361,7 @@ if test x"${install_sh+set}" != xset; then fi AC_SUBST([install_sh])]) -# Copyright (C) 2003-2014 Free Software Foundation, Inc. +# Copyright (C) 2003-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -382,7 +382,7 @@ AC_SUBST([am__leading_dot])]) # Fake the existence of programs that GNU maintainers use. -*- Autoconf -*- -# Copyright (C) 1997-2014 Free Software Foundation, Inc. +# Copyright (C) 1997-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -421,7 +421,7 @@ fi # Helper functions for option handling. -*- Autoconf -*- -# Copyright (C) 2001-2014 Free Software Foundation, Inc. +# Copyright (C) 2001-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -452,7 +452,7 @@ AC_DEFUN([_AM_IF_OPTION], # Check to make sure that the build environment is sane. -*- Autoconf -*- -# Copyright (C) 1996-2014 Free Software Foundation, Inc. +# Copyright (C) 1996-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -533,7 +533,7 @@ AC_CONFIG_COMMANDS_PRE( rm -f conftest.file ]) -# Copyright (C) 2009-2014 Free Software Foundation, Inc. +# Copyright (C) 2009-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -593,7 +593,7 @@ AC_SUBST([AM_BACKSLASH])dnl _AM_SUBST_NOTMAKE([AM_BACKSLASH])dnl ]) -# Copyright (C) 2001-2014 Free Software Foundation, Inc. +# Copyright (C) 2001-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -621,7 +621,7 @@ fi INSTALL_STRIP_PROGRAM="\$(install_sh) -c -s" AC_SUBST([INSTALL_STRIP_PROGRAM])]) -# Copyright (C) 2006-2014 Free Software Foundation, Inc. +# Copyright (C) 2006-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, @@ -640,7 +640,7 @@ AC_DEFUN([AM_SUBST_NOTMAKE], [_AM_SUBST_NOTMAKE($@)]) # Check how to create a tarball. -*- Autoconf -*- -# Copyright (C) 2004-2014 Free Software Foundation, Inc. +# Copyright (C) 2004-2017 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, diff --git a/configure b/configure index f9efdce0..9e4d23d8 100755 --- a/configure +++ b/configure @@ -1,6 +1,6 @@ #! /bin/sh # Guess values for system-dependent variables and create Makefiles. -# Generated by GNU Autoconf 2.69 for parallel 20180922. +# Generated by GNU Autoconf 2.69 for parallel 20181022. # # Report bugs to . # @@ -579,8 +579,8 @@ MAKEFLAGS= # Identity of this package. PACKAGE_NAME='parallel' PACKAGE_TARNAME='parallel' -PACKAGE_VERSION='20180922' -PACKAGE_STRING='parallel 20180922' +PACKAGE_VERSION='20181022' +PACKAGE_STRING='parallel 20181022' PACKAGE_BUGREPORT='bug-parallel@gnu.org' PACKAGE_URL='' @@ -1214,7 +1214,7 @@ if test "$ac_init_help" = "long"; then # Omit some internal or obsolete options to make the list less imposing. # This message is too long to be a string in the A/UX 3.1 sh. cat <<_ACEOF -\`configure' configures parallel 20180922 to adapt to many kinds of systems. +\`configure' configures parallel 20181022 to adapt to many kinds of systems. Usage: $0 [OPTION]... [VAR=VALUE]... @@ -1281,7 +1281,7 @@ fi if test -n "$ac_init_help"; then case $ac_init_help in - short | recursive ) echo "Configuration of parallel 20180922:";; + short | recursive ) echo "Configuration of parallel 20181022:";; esac cat <<\_ACEOF @@ -1357,7 +1357,7 @@ fi test -n "$ac_init_help" && exit $ac_status if $ac_init_version; then cat <<\_ACEOF -parallel configure 20180922 +parallel configure 20181022 generated by GNU Autoconf 2.69 Copyright (C) 2012 Free Software Foundation, Inc. @@ -1374,7 +1374,7 @@ cat >config.log <<_ACEOF This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. -It was created by parallel $as_me 20180922, which was +It was created by parallel $as_me 20181022, which was generated by GNU Autoconf 2.69. Invocation command line was $ $0 $@ @@ -2237,7 +2237,7 @@ fi # Define the identity of the package. PACKAGE='parallel' - VERSION='20180922' + VERSION='20181022' cat >>confdefs.h <<_ACEOF @@ -2880,7 +2880,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1 # report actual input values of CONFIG_FILES etc. instead of their # values after options handling. ac_log=" -This file was extended by parallel $as_me 20180922, which was +This file was extended by parallel $as_me 20181022, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = $CONFIG_FILES @@ -2942,7 +2942,7 @@ _ACEOF cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1 ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`" ac_cs_version="\\ -parallel config.status 20180922 +parallel config.status 20181022 configured by $0, generated by GNU Autoconf 2.69, with options \\"\$ac_cs_config\\" diff --git a/configure.ac b/configure.ac index 3ec179fd..4bb8226f 100644 --- a/configure.ac +++ b/configure.ac @@ -1,4 +1,4 @@ -AC_INIT([parallel], [20180922], [bug-parallel@gnu.org]) +AC_INIT([parallel], [20181022], [bug-parallel@gnu.org]) AM_INIT_AUTOMAKE([-Wall -Werror foreign]) AC_CONFIG_HEADERS([config.h]) AC_CONFIG_FILES([ diff --git a/packager/obs/home:tange/parallel/.osc/_files b/packager/obs/home:tange/parallel/.osc/_files index ef9c8e1a..ea39af46 100644 --- a/packager/obs/home:tange/parallel/.osc/_files +++ b/packager/obs/home:tange/parallel/.osc/_files @@ -1,6 +1,6 @@ - - - - - + + + + + diff --git a/packager/obs/home:tange/parallel/.osc/parallel.spec b/packager/obs/home:tange/parallel/.osc/parallel.spec index 07636beb..caa75017 100644 --- a/packager/obs/home:tange/parallel/.osc/parallel.spec +++ b/packager/obs/home:tange/parallel/.osc/parallel.spec @@ -1,7 +1,7 @@ Summary: Shell tool for executing jobs in parallel Name: parallel -Version: 20180922 +Version: 20181022 Release: 1.2 License: GPL Group: Productivity/File utilities diff --git a/packager/obs/home:tange/parallel/parallel.spec b/packager/obs/home:tange/parallel/parallel.spec index 07636beb..caa75017 100644 --- a/packager/obs/home:tange/parallel/parallel.spec +++ b/packager/obs/home:tange/parallel/parallel.spec @@ -1,7 +1,7 @@ Summary: Shell tool for executing jobs in parallel Name: parallel -Version: 20180922 +Version: 20181022 Release: 1.2 License: GPL Group: Productivity/File utilities diff --git a/src/Makefile.in b/src/Makefile.in index 392ecd5c..94f7dff0 100644 --- a/src/Makefile.in +++ b/src/Makefile.in @@ -1,7 +1,7 @@ -# Makefile.in generated by automake 1.15 from Makefile.am. +# Makefile.in generated by automake 1.15.1 from Makefile.am. # @configure_input@ -# Copyright (C) 1994-2014 Free Software Foundation, Inc. +# Copyright (C) 1994-2017 Free Software Foundation, Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, diff --git a/src/niceload b/src/niceload index 0096ab00..f43763c1 100755 --- a/src/niceload +++ b/src/niceload @@ -24,7 +24,7 @@ use strict; use Getopt::Long; $Global::progname="niceload"; -$Global::version = 20180923; +$Global::version = 20181022; Getopt::Long::Configure("bundling","require_order"); get_options_from_array(\@ARGV) || die_usage(); if($opt::version) { diff --git a/src/parallel b/src/parallel index 07297ea0..4196c6c8 100755 --- a/src/parallel +++ b/src/parallel @@ -1554,7 +1554,7 @@ sub check_invalid_option_combinations { sub init_globals { # Defaults: - $Global::version = 20180923; + $Global::version = 20181022; $Global::progname = 'parallel'; $Global::infinity = 2**31; $Global::debug = 0; diff --git a/src/sql b/src/sql index b878ed7a..504d106d 100755 --- a/src/sql +++ b/src/sql @@ -576,7 +576,7 @@ $Global::Initfile && unlink $Global::Initfile; exit ($err); sub parse_options { - $Global::version = 20180923; + $Global::version = 20181022; $Global::progname = 'sql'; # This must be done first as this may exec myself