mirror of
https://git.savannah.gnu.org/git/parallel.git
synced 2024-11-22 05:57:54 +00:00
Fixed bug #46520: --basefile cleans up without --cleanup.
qqx() is qx{} with stderr ignored.
{= $_ = total_jobs() =} can now be used.
This commit is contained in:
Ole Tange
parent
1625b42946
commit
b14ca07563
2
NEWS
2
NEWS
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@ -12,8 +12,6 @@
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* GNU Parallel was cited in: A Detailed Characterization of Errors in Logic Circuits due to Single-Event Transients http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=7302348&url=http%3A%2F%2Fieeexplore.ieee.org%2Fxpls%2Fabs_all.jsp%3Farnumber%3D7302348
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* GNU Parallel was cited in: Exploiting Multiple Levels of Parallelism in Sparse Matrix-Matrix Multiplication http://arxiv.org/pdf/1510.00844.pdf
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* GNU Parallel was cited in: Arabic Speaker Emotion Classification Using Rhythm Metrics and Neural Networks http://www.eurasip.org/Proceedings/Eusipco/Eusipco2015/papers/1570104855.pdf
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* GNU Parallel was cited in: Stride Search: a general algorithm for storm detection in high resolution climate data http://www.geosci-model-dev-discuss.net/8/7727/2015/gmdd-8-7727-2015.pdf
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@ -4,7 +4,7 @@
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Check that documentation is updated (compare to web):
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Fixet for 20151022
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Fixet for 20151122
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git diff last-release-commit
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Unmodified beta since last version => production
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Unmodified alpha since last version => beta
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@ -212,9 +212,9 @@ cc:Tim Cuthbertson <tim3d.junk@gmail.com>,
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Ryoichiro Suzuki <ryoichiro.suzuki@gmail.com>,
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Jesse Alama <jesse.alama@gmail.com>
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Subject: GNU Parallel 20151122 ('Kronan/Sharm el-Sheik/Bataclan') released <<[stable]>>
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Subject: GNU Parallel 20151222 ('') released <<[stable]>>
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GNU Parallel 20151122 ('Kronan/Sharm el-Sheik/Bataclan') <<[stable]>> has been released. It is available for download at: http://ftp.gnu.org/gnu/parallel/
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GNU Parallel 20151222 ('') <<[stable]>> has been released. It is available for download at: http://ftp.gnu.org/gnu/parallel/
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<<No new functionality was introduced so this is a good candidate for a stable release.>>
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@ -236,34 +236,9 @@ http://www.researchgate.net/profile/Christoph_Junghans/publication/276178326_TAD
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* << Update forventet juni Rachel har lige svaret >> GNU Parallel was used in: SISRS: Site Identification from Short Read Sequences https://github.com/rachelss/SISRS/
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* GNU Parallel packaged for CERN CentOS: http://linuxsoft.cern.ch/cern/centos/7/cern/x86_64/repoview/parallel.html
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* GNU Parallel was cited in: The Outer Solar System Origins Survey: I. Design and First-Quarter Discoveries http://arxiv.org/pdf/1511.02895.pdf
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* GNU Parallel was cited in: Contrasting genetic architectures of schizophrenia and other complex diseases using fast variance-components analysis http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3431.html
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* GNU Parallel was cited in: Named-Entity Chunking for Norwegian Text using Support Vector Machines http://ojs.bibsys.no/index.php/NIK/article/viewFile/248/211
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* GNU Parallel was cited in: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004381#pcbi.1004381.ref072
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* GNU Parallel was cited in: A Detailed Characterization of Errors in Logic Circuits due to Single-Event Transients http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=7302348&url=http%3A%2F%2Fieeexplore.ieee.org%2Fxpls%2Fabs_all.jsp%3Farnumber%3D7302348
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* GNU Parallel was cited in: Exploiting Multiple Levels of Parallelism in Sparse Matrix-Matrix Multiplication http://arxiv.org/pdf/1510.00844.pdf
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* GNU Parallel was cited in: Arabic Speaker Emotion Classification Using Rhythm Metrics and Neural Networks http://www.eurasip.org/Proceedings/Eusipco/Eusipco2015/papers/1570104855.pdf
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* GNU Parallel was cited in: Stride Search: a general algorithm for storm detection in high resolution climate data http://www.geosci-model-dev-discuss.net/8/7727/2015/gmdd-8-7727-2015.pdf
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* GNU Parallel was cited in: Decomposing Digital Paintings into Layers via RGB-space Geometry http://arxiv.org/pdf/1509.03335.pdf
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* GNU Parallel was cited in: Structure and evolutionary history of a large family of NLR proteins in the zebrafish http://www.biorxiv.org/content/biorxiv/early/2015/09/18/027151.full.pdf
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* Automating large numbers of tasks https://rcc.uchicago.edu/docs/tutorials/kicp-tutorials/running-jobs.html
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* Max out your IOPs with GNU Parallel http://blog.bitratchet.com/2015/11/11/max-out-your-iops-with-gnu-parallel/
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* GNU Parallel was cited in: Evolution of movement strategies under competitive interactions http://digital.csic.es/bitstream/10261/115973/1/evolution_movement_strategies_Kiziridis.pdf
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* GNU Parallel was cited in: Achieving Consistent Doppler Measurements from SDO/HMI Vector Field Inversions http://arxiv.org/pdf/1511.06500.pdf
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* 使用 GNU parallel 來平行運算http://mutolisp.logdown.com/posts/316959-using-gnu-parallel-to-parallel-computing
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* Bug fixes and man page updates.
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115
src/parallel
115
src/parallel
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@ -1118,7 +1118,7 @@ sub check_invalid_option_combinations {
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sub init_globals {
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# Defaults:
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$Global::version = 20151122;
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$Global::version = 20151123;
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$Global::progname = 'parallel';
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$Global::infinity = 2**31;
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$Global::debug = 0;
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@ -1150,7 +1150,7 @@ sub init_globals {
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'{/..}' => 's:.*/::; s:\.[^/.]+$::; s:\.[^/.]+$::',
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'{/...}' => 's:.*/::; s:\.[^/.]+$::; s:\.[^/.]+$::; s:\.[^/.]+$::',
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# {##} = number of jobs
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'{##}' => '$_=$Global::JobQueue->total_jobs()',
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'{##}' => '$_=total_jobs()',
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);
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# Modifiable copy of %Global::replace
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%Global::rpl = %Global::replace;
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@ -1682,7 +1682,7 @@ sub cleanup {
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# Returns: N/A
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unlink keys %Global::unlink;
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map { rmdir $_ } keys %Global::unlink;
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if(@opt::basefile) { cleanup_basefile(); }
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if(@opt::basefile and $opt::cleanup) { cleanup_basefile(); }
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}
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sub __QUOTING_ARGUMENTS_FOR_SHELL__ {}
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@ -2508,7 +2508,7 @@ sub progress {
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$last_column_time = time;
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$columns = $ENV{'COLUMNS'};
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if(not $columns) {
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my $stty = qx{ stty -a </dev/tty };
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my $stty = ::qqx("stty -a </dev/tty");
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# FreeBSD/OpenBSD/NetBSD/Dragonfly/MirOS
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# MacOSX/IRIX/AIX/Tru64
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$stty =~ /(\d+) columns/ and do { $columns = $1; };
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@ -2520,7 +2520,7 @@ sub progress {
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$stty =~ /rows=\d+,(\d+)/ and do { $columns = $1; };
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}
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if(not $columns) {
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my $resize = qx{ sh -c 'resize 2>/dev/null' };
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my $resize = ::qqx("resize");
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$resize =~ /COLUMNS=(\d+);/ and do { $columns = $1; };
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}
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$columns ||= 80;
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@ -3116,7 +3116,7 @@ sub onall {
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close $parallel_fh;
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$Global::exitstatus = $? >> 8;
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debug("init", "--onall exitvalue ", $?);
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if(@opt::basefile) { cleanup_basefile(); }
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if(@opt::basefile and $opt::cleanup) { cleanup_basefile(); }
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$Global::debug or unlink(@argfiles);
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my %seen;
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for my $joblog (@joblogs) {
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@ -3150,11 +3150,11 @@ sub save_original_signal_handler {
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# %Global::original_sig
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# Returns: N/A
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$SIG{INT} = sub {
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if($opt::tmux) { qx { tmux kill-session -t p$$ }; }
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if($opt::tmux) { ::qqx("tmux kill-session -t p$$"); }
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wait_and_exit(255);
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};
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$SIG{TERM} = sub {
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if($opt::tmux) { qx { tmux kill-session -t p$$ }; }
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if($opt::tmux) { ::qqx("tmux kill-session -t p$$"); }
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wait_and_exit(255);
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};
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%Global::original_sig = %SIG;
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@ -3399,7 +3399,7 @@ sub usage {
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" O. Tange (2011): GNU Parallel - The Command-Line Power Tool,",
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" ;login: The USENIX Magazine, February 2011:42-47.",
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"",
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"This helps funding further development; and it won't cost you a cent.",
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"This helps funding further development; AND IT WON'T COST YOU A CENT.",
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"If you pay 10000 EUR you should feel free to use GNU Parallel without citing.\n",
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"");
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}
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@ -3427,7 +3427,7 @@ sub citation_notice {
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" O. Tange (2011): GNU Parallel - The Command-Line Power Tool,\n",
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" ;login: The USENIX Magazine, February 2011:42-47.\n",
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"\n",
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"This helps funding further development; and it won't cost you a cent.\n",
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"This helps funding further development; AND IT WON'T COST YOU A CENT.\n",
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"If you pay 10000 EUR you should feel free to use GNU Parallel without citing.\n",
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"\n",
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"To silence the citation notice: run 'parallel --bibtex'.\n\n",
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@ -3507,7 +3507,7 @@ sub bibtex {
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"",
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"(Feel free to use \\nocite{Tange2011a})",
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"",
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"This helps funding further development; and it won't cost you a cent.",
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"This helps funding further development; AND IT WON'T COST YOU A CENT.",
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"If you pay 10000 EUR you should feel free to use GNU Parallel without citing.",
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"",
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"If you send a copy of your published article to tange\@gnu.org, it will be",
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@ -3600,6 +3600,19 @@ sub tmpfifo {
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return $tmpfifo;
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}
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sub qqx {
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# Like qx but with clean environment (except for $PATH)
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# and STDERR ignored
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# This is needed if the environment contains functions
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# that /bin/sh does not understand
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my $devnull = $Global::debug ? "" : "exec 2>/dev/null;";
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return qx{ $devnull @_ };
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my $PATH = $ENV{'PATH'};
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local(%ENV);
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$ENV{'PATH'} = $PATH;
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return qx{ ( @_ ) 2>/dev/null };
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}
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sub uniq {
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# Remove duplicates and return unique values
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return keys %{{ map { $_ => 1 } @_ }};
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@ -4247,8 +4260,8 @@ sub memfree_recompute {
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my $script = memfreescript();
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# TODO add sshlogin and backgrounding
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# Run it twice if it gives 0
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$self->{'memfree'} = qx{ $script } || qx{ $script };
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# Run the script twice if it gives 0 (typically intermittent error)
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$self->{'memfree'} = ::qqx($script) || ::qqx($script);
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if(not $self->{'memfree'}) {
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::die_bug("Less than 1 byte free");
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}
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@ -4366,7 +4379,7 @@ sub swap_activity {
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my $file = $self->{'swap_activity_file'};
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my ($dummy_fh, $tmpfile) = ::tmpfile(SUFFIX => ".swp");
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::debug("swap", "\n", $swap_activity, "\n");
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qx{ ($swap_activity > $tmpfile && mv $tmpfile $file || rm $tmpfile) & };
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::qqx("($swap_activity > $tmpfile && mv $tmpfile $file || rm $tmpfile) &");
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}
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return $self->{'swap_activity'};
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}
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@ -4664,7 +4677,7 @@ sub loadavg {
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::debug("load", "Cmd: ", $cmd);
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my $file = $self->{'loadavg_file'};
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my ($dummy_fh, $tmpfile) = ::tmpfile(SUFFIX => ".loa");
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qx{ ($cmd > $tmpfile && mv $tmpfile $file || rm $tmpfile) & };
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::qqx(" ($cmd > $tmpfile && mv $tmpfile $file || rm $tmpfile) & ");
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}
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return $self->{'loadavg'};
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}
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@ -5096,10 +5109,10 @@ sub ncpus {
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my $ncpu;
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my $sqe = ::shell_quote_scalar($Global::envvar);
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if($opt::use_cpus_instead_of_cores) {
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$ncpu = qx(echo|$sshcmd $serverlogin -- $sqe parallel --number-of-cpus);
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$ncpu = ::qqx("echo|$sshcmd $serverlogin -- $sqe parallel --number-of-cpus");
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} else {
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::debug("init",qq(echo|$sshcmd $serverlogin -- $sqe parallel --number-of-cores\n));
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$ncpu = qx(echo|$sshcmd $serverlogin -- $sqe parallel --number-of-cores);
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$ncpu = ::qqx("echo|$sshcmd $serverlogin -- $sqe parallel --number-of-cores");
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}
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chomp $ncpu;
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if($ncpu =~ /^\s*[0-9]+\s*$/s) {
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@ -5232,7 +5245,7 @@ sub no_of_cores {
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sub nproc {
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# Returns:
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# Number of cores using `nproc`
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my $no_of_cores = qx{ sh -c 'nproc 2>/dev/null' };
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my $no_of_cores = ::qqx("nproc");
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return $no_of_cores;
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}
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@ -5308,9 +5321,9 @@ sub no_of_cpus_freebsd {
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# Number of physical CPUs on FreeBSD
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# undef if not FreeBSD
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my $no_of_cpus =
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(qx{ sh -c 'sysctl -a dev.cpu 2>/dev/null' | grep \%parent | awk '{ print \$2 }' | uniq | wc -l | awk '{ print \$1 }' }
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(::qqx(qq{ sysctl -a dev.cpu | grep \%parent | awk '{ print \$2 }' | uniq | wc -l | awk '{ print \$1 }' })
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or
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qx{ sh -c 'sysctl hw.ncpu 2>/dev/null' | awk '{ print \$2 }' });
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::qqx(qq{ sysctl hw.ncpu | awk '{ print \$2 }' }));
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chomp $no_of_cpus;
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return $no_of_cpus;
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}
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@ -5320,9 +5333,9 @@ sub no_of_cores_freebsd {
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# Number of CPU cores on FreeBSD
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# undef if not FreeBSD
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my $no_of_cores =
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(qx{ sh -c 'sysctl hw.ncpu 2>/dev/null' | awk '{ print \$2 }' }
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(::qqx(qq{ sysctl hw.ncpu | awk '{ print \$2 }' })
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or
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qx{ sh -c 'sysctl -a hw 2>/dev/null' | grep [^a-z]logicalcpu[^a-z] | awk '{ print \$2 }' });
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::qqx(qq{ sysctl -a dev.cpu | grep \%parent | awk '{ print \$2 }' | uniq | wc -l | awk '{ print \$1 }' }));
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chomp $no_of_cores;
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return $no_of_cores;
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}
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@ -5331,7 +5344,7 @@ sub no_of_cpus_netbsd {
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# Returns:
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# Number of physical CPUs on NetBSD
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# undef if not NetBSD
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my $no_of_cpus = qx{ sh -c 'sysctl -n hw.ncpu 2>/dev/null' };
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my $no_of_cpus = ::qqx("sysctl -n hw.ncpu");
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chomp $no_of_cpus;
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return $no_of_cpus;
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}
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@ -5340,7 +5353,7 @@ sub no_of_cores_netbsd {
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# Returns:
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# Number of CPU cores on NetBSD
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# undef if not NetBSD
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my $no_of_cores = qx{ sh -c 'sysctl -n hw.ncpu 2>/dev/null' };
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my $no_of_cores = ::qqx("sysctl -n hw.ncpu");
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chomp $no_of_cores;
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return $no_of_cores;
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}
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@ -5349,7 +5362,7 @@ sub no_of_cpus_openbsd {
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# Returns:
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# Number of physical CPUs on OpenBSD
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# undef if not OpenBSD
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my $no_of_cpus = qx{ sh -c 'sysctl -n hw.ncpu 2>/dev/null' };
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my $no_of_cpus = ::qqx('sysctl -n hw.ncpu');
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chomp $no_of_cpus;
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return $no_of_cpus;
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}
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@ -5358,7 +5371,7 @@ sub no_of_cores_openbsd {
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# Returns:
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# Number of CPU cores on OpenBSD
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# undef if not OpenBSD
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my $no_of_cores = qx{ sh -c 'sysctl -n hw.ncpu 2>/dev/null' };
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my $no_of_cores = ::qqx('sysctl -n hw.ncpu');
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chomp $no_of_cores;
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return $no_of_cores;
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}
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@ -5367,7 +5380,7 @@ sub no_of_cpus_hurd {
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# Returns:
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# Number of physical CPUs on HURD
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# undef if not HURD
|
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my $no_of_cpus = qx{ nproc };
|
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my $no_of_cpus = ::qqx("nproc");
|
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chomp $no_of_cpus;
|
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return $no_of_cpus;
|
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}
|
||||
|
|
@ -5376,19 +5389,19 @@ sub no_of_cores_hurd {
|
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# Returns:
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# Number of physical CPUs on HURD
|
||||
# undef if not HURD
|
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my $no_of_cores = `nproc`;
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my $no_of_cores = ::qqx("nproc");
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chomp $no_of_cores;
|
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return $no_of_cores;
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}
|
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|
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sub no_of_cpus_darwin {
|
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# Returns:
|
||||
# Number of physical CPUs on Mac Darwin
|
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# undef if not Mac Darwin
|
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# Number of physical CPUs on MacOSX Darwin
|
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# undef if not MacOSX Darwin
|
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my $no_of_cpus =
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(qx{ sh -c 'sysctl -n hw.physicalcpu 2>/dev/null' }
|
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(::qqx('sysctl -n hw.physicalcpu')
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or
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qx{ sh -c 'sysctl -a hw 2>/dev/null' | grep [^a-z]physicalcpu[^a-z] | awk '{ print \$2 }' });
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::qqx(qq{ sysctl -a hw | grep [^a-z]physicalcpu[^a-z] | awk '{ print \$2 }' }));
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return $no_of_cpus;
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}
|
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|
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|
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@ -5397,9 +5410,9 @@ sub no_of_cores_darwin {
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# Number of CPU cores on Mac Darwin
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# undef if not Mac Darwin
|
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my $no_of_cores =
|
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(qx{ sh -c 'sysctl -n hw.logicalcpu 2>/dev/null' }
|
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(::qqx('sysctl -n hw.logicalcpu')
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or
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qx{ sh -c 'sysctl -a hw 2>/dev/null' | grep [^a-z]logicalcpu[^a-z] | awk '{ print \$2 }' });
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::qqx(qq{ sysctl -a hw | grep [^a-z]logicalcpu[^a-z] | awk '{ print \$2 }' }));
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return $no_of_cores;
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}
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|
|
@ -5408,13 +5421,13 @@ sub no_of_cpus_solaris {
|
|||
# Number of physical CPUs on Solaris
|
||||
# undef if not Solaris
|
||||
if(-x "/usr/sbin/psrinfo") {
|
||||
my @psrinfo = `/usr/sbin/psrinfo`;
|
||||
my @psrinfo = ::qqx("/usr/sbin/psrinfo");
|
||||
if($#psrinfo >= 0) {
|
||||
return $#psrinfo +1;
|
||||
}
|
||||
}
|
||||
if(-x "/usr/sbin/prtconf") {
|
||||
my @prtconf = qx{ /usr/sbin/prtconf | grep cpu..instance };
|
||||
my @prtconf = ::qqx("/usr/sbin/prtconf | grep cpu..instance");
|
||||
if($#prtconf >= 0) {
|
||||
return $#prtconf +1;
|
||||
}
|
||||
|
|
@ -5427,13 +5440,13 @@ sub no_of_cores_solaris {
|
|||
# Number of CPU cores on Solaris
|
||||
# undef if not Solaris
|
||||
if(-x "/usr/sbin/psrinfo") {
|
||||
my @psrinfo = `/usr/sbin/psrinfo`;
|
||||
my @psrinfo = ::qqx("/usr/sbin/psrinfo");
|
||||
if($#psrinfo >= 0) {
|
||||
return $#psrinfo +1;
|
||||
}
|
||||
}
|
||||
if(-x "/usr/sbin/prtconf") {
|
||||
my @prtconf = qx{ /usr/sbin/prtconf | grep cpu..instance };
|
||||
my @prtconf = ::qqx("/usr/sbin/prtconf | grep cpu..instance");
|
||||
if($#prtconf >= 0) {
|
||||
return $#prtconf +1;
|
||||
}
|
||||
|
|
@ -5476,7 +5489,7 @@ sub no_of_cpus_hpux {
|
|||
# Number of physical CPUs on HP-UX
|
||||
# undef if not HP-UX
|
||||
my $no_of_cpus =
|
||||
qx{ sh -c '/usr/bin/mpsched -s 2>&1' | grep 'Locality Domain Count' | awk '{ print \$4 }'};
|
||||
::qqx(qq{ /usr/bin/mpsched -s 2>&1 | grep 'Locality Domain Count' | awk '{ print \$4 }'});
|
||||
return $no_of_cpus;
|
||||
}
|
||||
|
||||
|
|
@ -5485,7 +5498,7 @@ sub no_of_cores_hpux {
|
|||
# Number of CPU cores on HP-UX
|
||||
# undef if not HP-UX
|
||||
my $no_of_cores =
|
||||
qx{ sh -c '/usr/bin/mpsched -s 2>&1' | perl -ne '/Processor Count\\D+(\\d+)/ and print "\$1\n"'};
|
||||
::qqx(qq{ /usr/bin/mpsched -s 2>&1 | perl -ne '/Processor Count\\D+(\\d+)/ and print "\$1\n"'});
|
||||
return $no_of_cores;
|
||||
}
|
||||
|
||||
|
|
@ -5513,7 +5526,7 @@ sub no_of_cpus_openserver {
|
|||
# undef if not SCO OpenServer
|
||||
my $no_of_cpus = 0;
|
||||
if(-x "/usr/sbin/psrinfo") {
|
||||
my @psrinfo = `/usr/sbin/psrinfo`;
|
||||
my @psrinfo = ::qqx("/usr/sbin/psrinfo");
|
||||
if($#psrinfo >= 0) {
|
||||
return $#psrinfo +1;
|
||||
}
|
||||
|
|
@ -5527,7 +5540,7 @@ sub no_of_cores_openserver {
|
|||
# undef if not SCO OpenServer
|
||||
my $no_of_cores = 0;
|
||||
if(-x "/usr/sbin/psrinfo") {
|
||||
my @psrinfo = `/usr/sbin/psrinfo`;
|
||||
my @psrinfo = ::qqx("/usr/sbin/psrinfo");
|
||||
if($#psrinfo >= 0) {
|
||||
return $#psrinfo +1;
|
||||
}
|
||||
|
|
@ -5539,7 +5552,7 @@ sub no_of_cpus_irix {
|
|||
# Returns:
|
||||
# Number of physical CPUs on IRIX
|
||||
# undef if not IRIX
|
||||
my $no_of_cpus = `hinv | grep HZ | grep Processor | awk '{print \$1}'`;
|
||||
my $no_of_cpus = ::qqx(qq{ hinv | grep HZ | grep Processor | awk '{print \$1}' });
|
||||
return $no_of_cpus;
|
||||
}
|
||||
|
||||
|
|
@ -5547,7 +5560,7 @@ sub no_of_cores_irix {
|
|||
# Returns:
|
||||
# Number of CPU cores on IRIX
|
||||
# undef if not IRIX
|
||||
my $no_of_cores = `hinv | grep HZ | grep Processor | awk '{print \$1}'`;
|
||||
my $no_of_cores = ::qqx(qq{ hinv | grep HZ | grep Processor | awk '{print \$1}' });
|
||||
return $no_of_cores;
|
||||
}
|
||||
|
||||
|
|
@ -5555,7 +5568,7 @@ sub no_of_cpus_tru64 {
|
|||
# Returns:
|
||||
# Number of physical CPUs on Tru64
|
||||
# undef if not Tru64
|
||||
my $no_of_cpus = `sizer -pr`;
|
||||
my $no_of_cpus = ::qqx("sizer -pr");
|
||||
return $no_of_cpus;
|
||||
}
|
||||
|
||||
|
|
@ -5563,7 +5576,7 @@ sub no_of_cores_tru64 {
|
|||
# Returns:
|
||||
# Number of CPU cores on Tru64
|
||||
# undef if not Tru64
|
||||
my $no_of_cores = `sizer -pr`;
|
||||
my $no_of_cores = ::qqx("sizer -pr");
|
||||
return $no_of_cores;
|
||||
}
|
||||
|
||||
|
|
@ -8777,9 +8790,9 @@ sub tmux_length {
|
|||
my @out;
|
||||
for my $l (1, 2020, 16320, 100000, $len) {
|
||||
my $tmpfile = ::tmpname("tms");
|
||||
my $tmuxcmd = "sh -c '".$ENV{'TMUX'}." -S $tmpfile new-session -d -n echo $l".
|
||||
("x"x$l). " 2>/dev/null' && echo $l; rm -f $tmpfile";
|
||||
push @out, qx{ $tmuxcmd };
|
||||
my $tmuxcmd = $ENV{'TMUX'}." -S $tmpfile new-session -d -n echo $l".
|
||||
("x"x$l). " && echo $l; rm -f $tmpfile";
|
||||
push @out, ::qqx($tmuxcmd);
|
||||
unlink $tmpfile;
|
||||
}
|
||||
::debug("tmux","tmux-length ",@out);
|
||||
|
|
@ -9191,6 +9204,10 @@ sub Q {
|
|||
return $a;
|
||||
}
|
||||
|
||||
sub total_jobs {
|
||||
return $Global::JobQueue->total_jobs()
|
||||
}
|
||||
|
||||
{
|
||||
my %perleval;
|
||||
|
||||
|
|
|
|||
|
|
@ -426,7 +426,7 @@ string that is not in the command line.
|
|||
See also: B<:::>.
|
||||
|
||||
|
||||
=item B<--bar> (beta testing)
|
||||
=item B<--bar>
|
||||
|
||||
Show progress as a progress bar. In the bar is shown: % of jobs
|
||||
completed, estimated seconds left, and number of jobs started.
|
||||
|
|
@ -513,7 +513,7 @@ I<size> defaults to 1M.
|
|||
See B<--pipe> and B<--pipepart> for use of this.
|
||||
|
||||
|
||||
=item B<--cat> (beta testing)
|
||||
=item B<--cat>
|
||||
|
||||
Create a temporary file with content. Normally B<--pipe>/B<--pipepart>
|
||||
will give data to the program on stdin (standard input). With B<--cat>
|
||||
|
|
@ -613,7 +613,7 @@ I<secs> seconds after starting each job. I<secs> can be less than 1
|
|||
second.
|
||||
|
||||
|
||||
=item B<--dry-run> (beta testing)
|
||||
=item B<--dry-run>
|
||||
|
||||
Print the job to run on stdout (standard output), but do not run the
|
||||
job. Use B<-v -v> to include the wrapping that GNU Parallel generates
|
||||
|
|
@ -672,7 +672,7 @@ and functions) use env_parallel as described under the option I<command>.
|
|||
See also: B<--record-env>.
|
||||
|
||||
|
||||
=item B<--eta> (beta testing)
|
||||
=item B<--eta>
|
||||
|
||||
Show the estimated number of seconds before finishing. This forces GNU
|
||||
B<parallel> to read all jobs before starting to find the number of
|
||||
|
|
@ -693,7 +693,7 @@ Implies B<--semaphore>.
|
|||
See also B<--bg>, B<man sem>.
|
||||
|
||||
|
||||
=item B<--fifo> (beta testing)
|
||||
=item B<--fifo>
|
||||
|
||||
Create a temporary fifo with content. Normally B<--pipe> and
|
||||
B<--pipepart> will give data to the program on stdin (standard
|
||||
|
|
@ -725,7 +725,7 @@ over B<--tollef>. The B<--tollef> option is now retired, and therefore
|
|||
may not be used. B<--gnu> is kept for compatibility.
|
||||
|
||||
|
||||
=item B<--group> (beta testing)
|
||||
=item B<--group>
|
||||
|
||||
Group output. Output from each jobs is grouped together and is only
|
||||
printed when the command is finished. stderr (standard error) first
|
||||
|
|
@ -747,9 +747,9 @@ See also: B<--line-buffer> B<--ungroup>
|
|||
Print a summary of the options to GNU B<parallel> and exit.
|
||||
|
||||
|
||||
=item B<--halt-on-error> I<val> (beta testing)
|
||||
=item B<--halt-on-error> I<val>
|
||||
|
||||
=item B<--halt> I<val> (beta testing)
|
||||
=item B<--halt> I<val>
|
||||
|
||||
When should GNU B<parallel> terminate? In some situations it makes no
|
||||
sense to run all jobs. GNU B<parallel> should simply give up as soon
|
||||
|
|
@ -1172,7 +1172,7 @@ performance is important use B<--pipepart>.
|
|||
See also: B<--recstart>, B<--recend>, B<--fifo>, B<--cat>, B<--pipepart>.
|
||||
|
||||
|
||||
=item B<--pipepart> (beta testing)
|
||||
=item B<--pipepart>
|
||||
|
||||
Pipe parts of a physical file. B<--pipepart> works similar to
|
||||
B<--pipe>, but is much faster. It has a few limitations:
|
||||
|
|
@ -1198,7 +1198,7 @@ control on the command line (used by GNU B<parallel> internally when
|
|||
called with B<--sshlogin>).
|
||||
|
||||
|
||||
=item B<--plus> (beta testing)
|
||||
=item B<--plus>
|
||||
|
||||
Activate additional replacement strings: {+/} {+.} {+..} {+...} {..}
|
||||
{...} {/..} {/...} {##}. The idea being that '{+foo}' matches the opposite of
|
||||
|
|
@ -1288,7 +1288,7 @@ Overrides an earlier B<--keep-order> (e.g. if set in
|
|||
B<~/.parallel/config>).
|
||||
|
||||
|
||||
=item B<--nice> I<niceness> (beta testing)
|
||||
=item B<--nice> I<niceness>
|
||||
|
||||
Run the command at this niceness. For simple commands you can just add
|
||||
B<nice> in front of the command. But if the command consists of more
|
||||
|
|
@ -1576,6 +1576,19 @@ it possible to define your own replacement strings. GNU B<parallel>'s
|
|||
--rpl '{/.} s:.*/::; s:\.[^/.]+$::;'
|
||||
--rpl '{.} s:\.[^/.]+$::'
|
||||
|
||||
The <--plus> replacement strings are implemented as:
|
||||
|
||||
--rpl '{+/} s:/[^/]*$::'
|
||||
--rpl '{+.} s:.*\.::'
|
||||
--rpl '{+..} s:.*\.([^.]*\.):$1:'
|
||||
--rpl '{+...} s:.*\.([^.]*\.[^.]*\.):$1:'
|
||||
--rpl '{..} s:\.[^/.]+$::; s:\.[^/.]+$::'
|
||||
--rpl '{...} s:\.[^/.]+$::; s:\.[^/.]+$::; s:\.[^/.]+$::'
|
||||
--rpl '{/..} s:.*/::; s:\.[^/.]+$::; s:\.[^/.]+$::'
|
||||
--rpl '{/...} s:.*/::; s:\.[^/.]+$::; s:\.[^/.]+$::; s:\.[^/.]+$::'
|
||||
--rpl '{##} $_=total_jobs()'
|
||||
|
||||
|
||||
If the user defined replacement string starts with '{' it can also be
|
||||
used as a positional replacement string (like B<{2.}>).
|
||||
|
||||
|
|
@ -1737,7 +1750,7 @@ Does not run the command but quotes it. Useful for making quoted
|
|||
composed commands for GNU B<parallel>.
|
||||
|
||||
|
||||
=item B<--shuf> (beta testing)
|
||||
=item B<--shuf>
|
||||
|
||||
Shuffle jobs. When having multiple input sources it is hard to
|
||||
randomize jobs. --shuf will generate all jobs, and shuffle them before
|
||||
|
|
@ -1765,13 +1778,13 @@ I<secs> seconds after starting each ssh. I<secs> can be less than 1
|
|||
seconds.
|
||||
|
||||
|
||||
=item B<-S> I<[@hostgroups/][ncpu/]sshlogin[,[@hostgroups/][ncpu/]sshlogin[,...]]> (beta testing)
|
||||
=item B<-S> I<[@hostgroups/][ncpu/]sshlogin[,[@hostgroups/][ncpu/]sshlogin[,...]]>
|
||||
|
||||
=item B<-S> I<@hostgroup> (beta testing)
|
||||
=item B<-S> I<@hostgroup>
|
||||
|
||||
=item B<--sshlogin> I<[@hostgroups/][ncpu/]sshlogin[,[@hostgroups/][ncpu/]sshlogin[,...]]> (beta testing)
|
||||
=item B<--sshlogin> I<[@hostgroups/][ncpu/]sshlogin[,[@hostgroups/][ncpu/]sshlogin[,...]]>
|
||||
|
||||
=item B<--sshlogin> I<@hostgroup> (beta testing)
|
||||
=item B<--sshlogin> I<@hostgroup>
|
||||
|
||||
Distribute jobs to remote computers. The jobs will be run on a list of
|
||||
remote computers.
|
||||
|
|
@ -2088,9 +2101,9 @@ Use B<-v> B<-v> to print the wrapping ssh command when running remotely.
|
|||
Print the version GNU B<parallel> and exit.
|
||||
|
||||
|
||||
=item B<--workdir> I<mydir> (beta testing)
|
||||
=item B<--workdir> I<mydir>
|
||||
|
||||
=item B<--wd> I<mydir> (beta testing)
|
||||
=item B<--wd> I<mydir>
|
||||
|
||||
Files transferred using B<--transfer> and B<--return> will be relative
|
||||
to I<mydir> on remote computers, and the command will be executed in
|
||||
|
|
|
|||
|
|
@ -36,7 +36,7 @@ echo 'bug #40134: FreeBSD: --shebang not working'
|
|||
|
||||
echo 'bug #40134: FreeBSD: --shebang(-wrap) not working'
|
||||
(echo '#!/usr/bin/env -S parallel --shebang-wrap /usr/bin/perl :::'; echo 'print @ARGV,"\n";') > shebang-wrap;
|
||||
chmod 755 ./shebang-wrap; ./shebang-wrap wrap works
|
||||
chmod 755 ./shebang-wrap; ./shebang-wrap wrap works | sort -r
|
||||
|
||||
echo 'bug #40134: FreeBSD: --shebang(-wrap) with options not working'
|
||||
(echo '#!/usr/bin/env -S parallel --shebang-wrap -v -k -j 0 /usr/bin/perl -w :::'; echo 'print @ARGV,"\n";') > shebang-wrap-opt;
|
||||
|
|
|
|||
|
|
@ -249,11 +249,11 @@ echo '**'
|
|||
|
||||
echo '{##} bug #45841: Replacement string for total no of jobs'
|
||||
|
||||
parallel --plus echo {##} ::: {a..j};
|
||||
parallel -k --plus echo {##} ::: {a..j};
|
||||
parallel -k 'echo {= $::G++ > 3 and ($_=$Global::JobQueue->total_jobs());=}' ::: {1..10}
|
||||
parallel -N7 --plus echo {#} {##} ::: {1..14}
|
||||
parallel -N7 --plus echo {#} {##} ::: {1..15}
|
||||
parallel -X --plus echo {#} {##} ::: {1..15}
|
||||
parallel -k -N7 --plus echo {#} {##} ::: {1..14}
|
||||
parallel -k -N7 --plus echo {#} {##} ::: {1..15}
|
||||
parallel -k -X --plus echo {#} {##} ::: {1..15}
|
||||
|
||||
echo '**'
|
||||
|
||||
|
|
|
|||
71
testsuite/tests-to-run/parallel-local-ssh6.sh
Normal file
71
testsuite/tests-to-run/parallel-local-ssh6.sh
Normal file
|
|
@ -0,0 +1,71 @@
|
|||
#!/bin/bash
|
||||
|
||||
SSHLOGIN1=parallel@lo
|
||||
SSHLOGIN2=csh@lo
|
||||
mkdir -p tmp
|
||||
|
||||
# -L1 will join lines ending in ' '
|
||||
cat <<'EOF' | sed -e s/\$SERVER1/$SERVER1/\;s/\$SERVER2/$SERVER2/\;s/\$SSHLOGIN1/$SSHLOGIN1/\;s/\$SSHLOGIN2/$SSHLOGIN2/ | parallel -vj5 -k --joblog /tmp/jl-`basename $0` -L1
|
||||
echo '### Test --onall';
|
||||
parallel --onall --tag -k -S $SSHLOGIN1,$SSHLOGIN2 '(echo {1} {2}) | awk \{print\ \$2}' ::: a b c ::: 1 2
|
||||
|
||||
echo '### Test | --onall';
|
||||
seq 3 | parallel --onall --tag -k -S $SSHLOGIN1,$SSHLOGIN2 '(echo {1} {2}) | awk \{print\ \$2}' ::: a b c :::: -
|
||||
|
||||
echo '### Test --onall -u';
|
||||
parallel --onall -S $SSHLOGIN1,$SSHLOGIN2 -u '(echo {1} {2}) | awk \{print\ \$2}' ::: a b c ::: 1 2 3 | sort
|
||||
|
||||
echo '### Test --nonall';
|
||||
parallel --nonall -k -S $SSHLOGIN1,$SSHLOGIN2 pwd | sort
|
||||
|
||||
echo '### Test --nonall -u - should be interleaved x y x y';
|
||||
parallel --nonall -S $SSHLOGIN1,$SSHLOGIN2 -u 'pwd|grep -q csh && sleep 3; pwd;sleep 12;pwd;'
|
||||
|
||||
echo '### Test read sshloginfile from STDIN';
|
||||
echo $SSHLOGIN1,$SSHLOGIN2 | parallel -S - -k --nonall pwd;
|
||||
echo $SSHLOGIN1,$SSHLOGIN2 | parallel --sshloginfile - -k --onall pwd\; echo ::: foo
|
||||
|
||||
echo '**'
|
||||
|
||||
echo '### Test --nonall --basefile';
|
||||
touch tmp/nonall--basefile;
|
||||
stdout parallel --nonall --basefile tmp/nonall--basefile -S $SSHLOGIN1,$SSHLOGIN2 ls tmp/nonall--basefile;
|
||||
stdout parallel --nonall -S $SSHLOGIN1,$SSHLOGIN2 rm tmp/nonall--basefile;
|
||||
stdout rm tmp/nonall--basefile
|
||||
|
||||
echo '**'
|
||||
|
||||
echo '### Test --onall --basefile';
|
||||
touch tmp/onall--basefile;
|
||||
stdout parallel --onall --basefile tmp/onall--basefile -S $SSHLOGIN1,$SSHLOGIN2 ls {} ::: tmp/onall--basefile;
|
||||
stdout parallel --onall -S $SSHLOGIN1,$SSHLOGIN2 rm {} ::: tmp/onall--basefile;
|
||||
stdout rm tmp/onall--basefile
|
||||
|
||||
echo '**'
|
||||
|
||||
echo '### Test --nonall --basefile --cleanup (rm should fail)';
|
||||
touch tmp/nonall--basefile--clean;
|
||||
stdout parallel --nonall --basefile tmp/nonall--basefile--clean --cleanup -S $SSHLOGIN1,$SSHLOGIN2 ls tmp/nonall--basefile--clean;
|
||||
stdout parallel --nonall -S $SSHLOGIN1,$SSHLOGIN2 rm tmp/nonall--basefile--clean;
|
||||
stdout rm tmp/nonall--basefile--clean
|
||||
|
||||
echo '**'
|
||||
|
||||
echo '### Test --onall --basefile --cleanup (rm should fail)';
|
||||
touch tmp/onall--basefile--clean;
|
||||
stdout parallel --onall --basefile tmp/onall--basefile--clean --cleanup -S $SSHLOGIN1,$SSHLOGIN2 ls {} ::: tmp/onall--basefile--clean;
|
||||
stdout parallel --onall -S $SSHLOGIN1,$SSHLOGIN2 rm {} ::: tmp/onall--basefile--clean;
|
||||
stdout rm tmp/onall--basefile--clean
|
||||
|
||||
echo '**'
|
||||
|
||||
echo '### Test --workdir .';
|
||||
ssh $SSHLOGIN1 mkdir -p mydir;
|
||||
mkdir -p $HOME/mydir; cd $HOME/mydir;
|
||||
parallel --workdir . -S $SSHLOGIN1 ::: pwd
|
||||
|
||||
echo '### Test --wd .';
|
||||
ssh $SSHLOGIN2 mkdir -p mydir;
|
||||
mkdir -p $HOME/mydir; cd $HOME/mydir;
|
||||
parallel --workdir . -S $SSHLOGIN2 ::: pwd
|
||||
EOF
|
||||
|
|
@ -44,7 +44,7 @@ It
|
|||
worked
|
||||
echo 'bug #40134: FreeBSD: --shebang(-wrap) not working'
|
||||
bug #40134: FreeBSD: --shebang(-wrap) not working
|
||||
(echo '#!/usr/bin/env -S parallel --shebang-wrap /usr/bin/perl :::'; echo 'print @ARGV,"\n";') > shebang-wrap; chmod 755 ./shebang-wrap; ./shebang-wrap wrap works
|
||||
(echo '#!/usr/bin/env -S parallel --shebang-wrap /usr/bin/perl :::'; echo 'print @ARGV,"\n";') > shebang-wrap; chmod 755 ./shebang-wrap; ./shebang-wrap wrap works | sort -r
|
||||
wrap
|
||||
works
|
||||
echo 'bug #40134: FreeBSD: --shebang(-wrap) with options not working'
|
||||
|
|
|
|||
|
|
@ -521,7 +521,7 @@ echo '**'
|
|||
**
|
||||
echo '{##} bug #45841: Replacement string for total no of jobs'
|
||||
{##} bug #45841: Replacement string for total no of jobs
|
||||
parallel --plus echo {##} ::: {a..j}; parallel -k 'echo {= $::G++ > 3 and ($_=$Global::JobQueue->total_jobs());=}' ::: {1..10}
|
||||
parallel -k --plus echo {##} ::: {a..j}; parallel -k 'echo {= $::G++ > 3 and ($_=$Global::JobQueue->total_jobs());=}' ::: {1..10}
|
||||
10
|
||||
10
|
||||
10
|
||||
|
|
@ -542,14 +542,14 @@ echo '{##} bug #45841: Replacement string for total no of jobs'
|
|||
10
|
||||
10
|
||||
10
|
||||
parallel -N7 --plus echo {#} {##} ::: {1..14}
|
||||
parallel -k -N7 --plus echo {#} {##} ::: {1..14}
|
||||
1 2 2 2 2 2 2 2
|
||||
2 2 2 2 2 2 2 2
|
||||
parallel -N7 --plus echo {#} {##} ::: {1..15}
|
||||
parallel -k -N7 --plus echo {#} {##} ::: {1..15}
|
||||
1 3 3 3 3 3 3 3
|
||||
2 3 3 3 3 3 3 3
|
||||
3 3
|
||||
parallel -X --plus echo {#} {##} ::: {1..15}
|
||||
parallel -k -X --plus echo {#} {##} ::: {1..15}
|
||||
1 15 15
|
||||
2 15 15
|
||||
3 15 15
|
||||
|
|
|
|||
|
|
@ -6,7 +6,7 @@ please cite:
|
|||
O. Tange (2011): GNU Parallel - The Command-Line Power Tool,
|
||||
;login: The USENIX Magazine, February 2011:42-47.
|
||||
|
||||
This helps funding further development; and it won't cost you a cent.
|
||||
This helps funding further development; AND IT WON'T COST YOU A CENT.
|
||||
If you pay 10000 EUR you should feel free to use GNU Parallel without citing.
|
||||
|
||||
To silence the citation notice: run 'parallel --bibtex'.
|
||||
|
|
@ -27,7 +27,7 @@ please cite:
|
|||
O. Tange (2011): GNU Parallel - The Command-Line Power Tool,
|
||||
;login: The USENIX Magazine, February 2011:42-47.
|
||||
|
||||
This helps funding further development; and it won't cost you a cent.
|
||||
This helps funding further development; AND IT WON'T COST YOU A CENT.
|
||||
If you pay 10000 EUR you should feel free to use GNU Parallel without citing.
|
||||
|
||||
To silence the citation notice: run 'parallel --bibtex'.
|
||||
|
|
|
|||
|
|
@ -176,7 +176,7 @@ please cite:
|
|||
O. Tange (2011): GNU Parallel - The Command-Line Power Tool,
|
||||
;login: The USENIX Magazine, February 2011:42-47.
|
||||
|
||||
This helps funding further development; and it won't cost you a cent.
|
||||
This helps funding further development; AND IT WON'T COST YOU A CENT.
|
||||
If you pay 10000 EUR you should feel free to use GNU Parallel without citing.
|
||||
|
||||
echo '### Test of -j filename'; echo 3 >/tmp/jobs_to_run1; parallel -j /tmp/jobs_to_run1 -v sleep {} ::: 10 8 6 5 4; # Should give 6 8 10 5 4
|
||||
|
|
|
|||
|
|
@ -980,7 +980,7 @@ please cite:
|
|||
O. Tange (2011): GNU Parallel - The Command-Line Power Tool,
|
||||
;login: The USENIX Magazine, February 2011:42-47.
|
||||
|
||||
This helps funding further development; and it won't cost you a cent.
|
||||
This helps funding further development; AND IT WON'T COST YOU A CENT.
|
||||
If you pay 10000 EUR you should feel free to use GNU Parallel without citing.
|
||||
|
||||
parallel --version
|
||||
|
|
@ -1019,7 +1019,7 @@ please cite:
|
|||
|
||||
(Feel free to use \nocite{Tange2011a})
|
||||
|
||||
This helps funding further development; and it won't cost you a cent.
|
||||
This helps funding further development; AND IT WON'T COST YOU A CENT.
|
||||
If you pay 10000 EUR you should feel free to use GNU Parallel without citing.
|
||||
|
||||
If you send a copy of your published article to tange@gnu.org, it will be
|
||||
|
|
|
|||
Loading…
Reference in a new issue