mirror of
https://git.savannah.gnu.org/git/parallel.git
synced 2024-11-25 23:47:53 +00:00
parallel: Fixed bug #48074: --pipe --block 90k blocks on windows.
Fixed bug with open3(x,x,x,"-") detection. Cleaned up some tests.
This commit is contained in:
Ole Tange
parent
7542609ef1
commit
bf0571e4a7
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@ -258,6 +258,8 @@ for Big Data Applications https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumb
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* <<link No citation: Next-generation TCP for ns-3 simulator http://www.sciencedirect.com/science/article/pii/S1569190X15300939>>
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* <<link No citation: Next-generation TCP for ns-3 simulator http://www.sciencedirect.com/science/article/pii/S1569190X15300939>>
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* Unix parallel: Populating all the USB sticks http://www.markhneedham.com/blog/2016/06/01/unix-parallel-populating-all-the-usb-sticks/
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* GNU Parallel is a fantastic utility https://www.dray.be/parallel/
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* GNU Parallel is a fantastic utility https://www.dray.be/parallel/
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* Tools of the trade http://onox.com.br/2015/05/tools-of-the-trade/#more-198
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* Tools of the trade http://onox.com.br/2015/05/tools-of-the-trade/#more-198
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67
src/parallel
67
src/parallel
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@ -466,19 +466,15 @@ sub spreadstdin {
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}
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}
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$Global::start_no_new_jobs ||= 1;
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$Global::start_no_new_jobs ||= 1;
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if($opt::roundrobin) {
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if($opt::roundrobin) {
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for my $job (values %Global::running) {
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# Flush blocks to roundrobin procs
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close $job->fh(0,"w");
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}
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my %incomplete_jobs = %Global::running;
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my $sleep = 1;
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my $sleep = 1;
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while(keys %incomplete_jobs) {
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while(%Global::running) {
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my $something_written = 0;
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my $something_written = 0;
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for my $pid (keys %incomplete_jobs) {
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for my $job (values %Global::running) {
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my $job = $incomplete_jobs{$pid};
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if($job->block_length()) {
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if($job->block_length()) {
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$something_written += $job->non_blocking_write();
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$something_written += $job->non_blocking_write();
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} else {
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} else {
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delete $incomplete_jobs{$pid}
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close $job->fh(0,"w");
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}
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}
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}
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}
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if($something_written) {
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if($something_written) {
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@ -6457,11 +6453,16 @@ sub write {
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my $len = length $$remaining_ref;
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my $len = length $$remaining_ref;
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# syswrite may not write all in one go,
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# syswrite may not write all in one go,
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# so make sure everything is written.
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# so make sure everything is written.
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while($len) {
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my $written;
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my $written = syswrite($stdin_fh,$$remaining_ref);
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while($written = syswrite($stdin_fh,$$remaining_ref)){
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substr($$remaining_ref,0,$written) = "";
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substr($$remaining_ref,0,$written) = "";
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$len -= $written;
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# Crazy cygwin - Without this, some data will silently be dropped
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# seq 100000 | parallel --block 83k --pipe -kj3 cat | wc
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$^O eq "cygwin" and ::usleep(200);
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}
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}
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# Crazy cygwin - Without this, some data will silently be dropped
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syswrite($stdin_fh,"");
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print $stdin_fh "";
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}
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}
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sub set_block {
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sub set_block {
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@ -6511,25 +6512,28 @@ sub non_blocking_write {
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my $self = shift;
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my $self = shift;
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my $something_written = 0;
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my $something_written = 0;
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use POSIX qw(:errno_h);
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use POSIX qw(:errno_h);
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# for loop used to avoid copying substr: $buf will be an alias for the substr
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for my $buf (substr($self->{'block'},$self->{'block_pos'})) {
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my $in = $self->fh(0,"w");
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my $in = $self->fh(0,"w");
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my $rv = syswrite($in,
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my $rv = syswrite($in, $buf);
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substr($self->{'block'},$self->{'block_pos'}));
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if (!defined($rv) && $! == EAGAIN) {
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if (!defined($rv) && $! == EAGAIN) {
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# would block
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# would block
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$something_written = 0;
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$something_written = 0;
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} elsif ($self->{'block_pos'}+$rv != $self->{'block_length'}) {
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} elsif ($self->{'block_pos'}+$rv != $self->{'block_length'}) {
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# incomplete write
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# incomplete write
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# Remove the written part
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# Remove the written part
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$self->{'block_pos'} += $rv;
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$self->{'block_pos'} += $rv;
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$something_written = $rv;
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$something_written = $rv;
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} else {
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} else {
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# successfully wrote everything
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# successfully wrote everything
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my $a = "";
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# Empty block to free memory
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$self->set_block(\$a,\$a,0,"","");
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my $a = "";
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$something_written = $rv;
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$self->set_block(\$a,\$a,0,"","");
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}
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$something_written = $rv;
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}
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}
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# Crazy cygwin - Without this, some data will silently be dropped
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# seq 100000 | parallel --block 83k --pipe -kj3 --round-robin cat | wc
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$^O eq "cygwin" and ::usleep(200);
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::debug("pipe", "Non-block: ", $something_written);
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::debug("pipe", "Non-block: ", $something_written);
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return $something_written;
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return $something_written;
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@ -7529,11 +7533,12 @@ sub start {
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# perl -e 'sleep(1);if(fork()){sleep(3)}while(not fork and time-$^T<8){ }'
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# perl -e 'sleep(1);if(fork()){sleep(3)}while(not fork and time-$^T<8){ }'
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no warnings 'redefine';
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no warnings 'redefine';
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my ($outfh,$name) = ::tmpfile(SUFFIX => ".tst");
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my ($outfh,$name) = ::tmpfile(SUFFIX => ".tst");
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# Test to see if open3(,,,"-") is supported
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# Test to see if open3(x,x,x,"-") is supported
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my $script = 'if(not $pid=::open3($i,$o,$e,"-")) { unlink shift }';
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my $script = 'if(not $pid=::open3($i,$o,$e,"-")) { unlink shift }';
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qx{ perl -MIPC::Open3 -e '$script' $name };
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qx{ perl -MIPC::Open3 -e '$script' $name 2>/dev/null };
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if(-e $name) {
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if(-e $name) {
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# Does not support open3(x,x,x,"-")
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# Does not support open3(x,x,x,"-")
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# Use (slow) external version
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unlink($name);
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unlink($name);
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*open3_setpgrp = \&open3_setpgrp_external;
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*open3_setpgrp = \&open3_setpgrp_external;
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} else {
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} else {
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@ -12,6 +12,8 @@ run_test() {
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base=`basename "$script" .sh`
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base=`basename "$script" .sh`
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export TMPDIR=/tmp/"$base"-tmpdir
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export TMPDIR=/tmp/"$base"-tmpdir
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mkdir -p "$TMPDIR"
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mkdir -p "$TMPDIR"
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# Clean before. May be owned by other users
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sudo rm -f /tmp/*.{tmx,pac,arg,all,log,swp,loa,ssh,df,pip,tmb,chr,tms,par}
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if [ "$TRIES" = "3" ] ; then
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if [ "$TRIES" = "3" ] ; then
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# Try 3 times
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# Try 3 times
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bash "$script" > actual-results/"$base"
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bash "$script" > actual-results/"$base"
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@ -22,38 +22,23 @@ echo '### tmux1.9'
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seq 700 800 | TMUX=tmux1.9 par_tmux
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seq 700 800 | TMUX=tmux1.9 par_tmux
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seq 800 900 | TMUX=tmux1.9 par_tmux
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seq 800 900 | TMUX=tmux1.9 par_tmux
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seq 900 1000 | TMUX=tmux1.9 par_tmux
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seq 900 1000 | TMUX=tmux1.9 par_tmux
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seq 1000 1100 | TMUX=tmux1.9 par_tmux
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seq 1000 1006 | TMUX=tmux1.9 par_tmux
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seq 1100 1200 | TMUX=tmux1.9 par_tmux
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seq 1200 1300 | TMUX=tmux1.9 par_tmux
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seq 1300 1400 | TMUX=tmux1.9 par_tmux
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seq 1400 1500 | TMUX=tmux1.9 par_tmux
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seq 1500 1600 | TMUX=tmux1.9 par_tmux
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seq 1600 1700 | TMUX=tmux1.9 par_tmux
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seq 1700 1800 | TMUX=tmux1.9 par_tmux
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seq 1800 1900 | TMUX=tmux1.9 par_tmux
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seq 1900 2000 | TMUX=tmux1.9 par_tmux
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seq 2000 2018 | TMUX=tmux1.9 par_tmux
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echo '### tmux1.9 fails'
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echo '### tmux1.9 fails'
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echo 2019 | TMUX=tmux1.9 par_tmux
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echo 1007 | TMUX=tmux1.9 par_tmux
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echo 2020 | TMUX=tmux1.9 par_tmux
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echo 1008 | TMUX=tmux1.9 par_tmux
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echo 2021 | TMUX=tmux1.9 par_tmux
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echo 1009 | TMUX=tmux1.9 par_tmux
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echo 2022 | TMUX=tmux1.9 par_tmux
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echo '### tmux1.8'
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echo '### tmux1.8'
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seq 1 50 | TMUX=tmux1.8 par_tmux
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seq 1 50 | TMUX=tmux1.8 par_tmux
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seq 51 100 | TMUX=tmux1.8 par_tmux
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seq 51 100 | TMUX=tmux1.8 par_tmux
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seq 101 150 | TMUX=tmux1.8 par_tmux
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seq 101 113 | TMUX=tmux1.8 par_tmux
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seq 151 200 | TMUX=tmux1.8 par_tmux
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seq 201 231 | TMUX=tmux1.8 par_tmux
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echo '### tmux1.8 fails'
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echo '### tmux1.8 fails'
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echo 232 | TMUX=tmux1.8 par_tmux
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echo 114 | TMUX=tmux1.8 par_tmux
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echo 233 | TMUX=tmux1.8 par_tmux
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echo 115 | TMUX=tmux1.8 par_tmux
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echo 234 | TMUX=tmux1.8 par_tmux
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echo 116 | TMUX=tmux1.8 par_tmux
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echo 235 | TMUX=tmux1.8 par_tmux
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echo 236 | TMUX=tmux1.8 par_tmux
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echo '### tmux1.8 0..255 ascii'
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echo '### tmux1.8 0..255 ascii'
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perl -e 'print map { ($_, map { pack("c*",$_) } grep { $_>=1 && $_!=10 } 0..$_),"\n" } 0..255' |
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perl -e 'print map { ($_, map { pack("c*",$_) } grep { $_>=1 && $_!=10 } $_-110..$_),"\n" } 0..255' |
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TMUX=tmux1.8 stdout parallel --tmux --timeout 3 echo | par_tmux_filter; echo $?
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TMUX=tmux1.8 stdout parallel --tmux --timeout 3 echo | par_tmux_filter; echo $?
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echo '### tmux1.9 0..255 ascii'
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echo '### tmux1.9 0..255 ascii'
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# Timings are often off
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# Timings are often off
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s/^(\d)$/9/;
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s/^(\d)$/9/;
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s/^(\d\d)$/99/;
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s/^(\d\d)$/99/;
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# Fails often due to race
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s/cat: input_file: No such file or directory\n//;
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s{rsync: link_stat "/home/parallel/input_file.out" .*\n}{};
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s{rsync error: some files/attrs were not transferred .*\n}{};
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'
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'
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# 3+3 .par files (from --files), 1 .tms-file from tmux attach
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# 3+3 .par files (from --files), 1 .tms-file from tmux attach
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find {$TMPDIR,/var/tmp,/tmp}/{fif,tms,par[^a]}* -mmin -10 2>/dev/null | wc -l
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find {$TMPDIR,/var/tmp,/tmp}/{fif,tms,par[^a]}* -mmin -10 2>/dev/null | wc -l
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@ -8,7 +8,7 @@ echo '### bug #44358: 2 GB records cause problems for -N'
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### bug #44358: 2 GB records cause problems for -N
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### bug #44358: 2 GB records cause problems for -N
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echo '5 GB version: Eats 12.5 GB'
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echo '5 GB version: Eats 12.5 GB'
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5 GB version: Eats 12.5 GB
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5 GB version: Eats 12.5 GB
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(yes "`seq 3000`" | head -c 5000000000; echo FOO; yes "`seq 3000`" | head -c 3000000000; echo FOO; yes "`seq 3000`" | head -c 1000000000;) | PERL5LIB=input-files/perl-v5.14.2/lib input-files/perl-v5.14.2/perl `which parallel` --pipe --recend FOO -N2 --block 1g -k LANG=c wc -c
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PATH=input-files/perl-v5.14.2:$PATH; (yes "`seq 3000`" | head -c 5000000000; echo FOO; yes "`seq 3000`" | head -c 3000000000; echo FOO; yes "`seq 3000`" | head -c 1000000000;) | PERL5LIB=input-files/perl-v5.14.2/lib input-files/perl-v5.14.2/perl `which parallel` --pipe --recend FOO -N2 --block 1g -k LANG=c wc -c
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8000000007
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8000000007
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1000000001
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1000000001
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parallel: Warning: A record was longer than 1000000000. Increasing to --blocksize 1300000001.
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parallel: Warning: A record was longer than 1000000000. Increasing to --blocksize 1300000001.
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@ -16,7 +16,7 @@ parallel: Warning: A record was longer than 1300000001. Increasing to --blocksiz
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parallel: Warning: A record was longer than 1690000003. Increasing to --blocksize 2147483647.
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parallel: Warning: A record was longer than 1690000003. Increasing to --blocksize 2147483647.
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echo '2 GB version: eats 10 GB'
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echo '2 GB version: eats 10 GB'
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2 GB version: eats 10 GB
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2 GB version: eats 10 GB
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(yes "`seq 3000`" | head -c 2300M; echo FOO; yes "`seq 3000`" | head -c 2300M; echo FOO; yes "`seq 3000`" | head -c 1000M;) | PERL5LIB=input-files/perl-v5.14.2/lib input-files/perl-v5.14.2/perl `which parallel` --pipe --recend FOO -N2 --block 1g -k LANG=c wc -c
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PATH=input-files/perl-v5.14.2:$PATH; (yes "`seq 3000`" | head -c 2300M; echo FOO; yes "`seq 3000`" | head -c 2300M; echo FOO; yes "`seq 3000`" | head -c 1000M;) | PERL5LIB=input-files/perl-v5.14.2/lib input-files/perl-v5.14.2/perl `which parallel` --pipe --recend FOO -N2 --block 1g -k LANG=c wc -c
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4823449607
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4823449607
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1048576001
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1048576001
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parallel: Warning: A record was longer than 1000000000. Increasing to --blocksize 1300000001.
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parallel: Warning: A record was longer than 1000000000. Increasing to --blocksize 1300000001.
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@ -42,12 +42,12 @@ perl -e '$buf=("x"x(2**31))."x"; substr($buf,0,2**31+1)=""; print ((length $buf)
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0
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0
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echo 'Eats 4.7 GB'
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echo 'Eats 4.7 GB'
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Eats 4.7 GB
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Eats 4.7 GB
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(yes "`seq 3000`" | head -c 2300M; echo ged) | PERL5LIB=input-files/perl-v5.14.2/lib input-files/perl-v5.14.2/perl `which parallel` -k --block 2G --pipe --recend ged md5sum
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PATH=input-files/perl-v5.14.2:$PATH; (yes "`seq 3000`" | head -c 2300M; echo ged) | PERL5LIB=input-files/perl-v5.14.2/lib input-files/perl-v5.14.2/perl `which parallel` -k --block 2G --pipe --recend ged md5sum
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8d87694eab8991a10815067709c3bd51 -
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8d87694eab8991a10815067709c3bd51 -
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parallel: Warning: --blocksize >= 2G causes problems. Using 2G-1.
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parallel: Warning: --blocksize >= 2G causes problems. Using 2G-1.
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echo 'Eats 4.7 GB'
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echo 'Eats 4.7 GB'
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Eats 4.7 GB
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Eats 4.7 GB
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(yes "`seq 3000`" | head -c 2300M; echo ged) | PERL5LIB=input-files/perl-v5.14.2/lib input-files/perl-v5.14.2/perl `which parallel` -k --block 2G --pipe --recend ged cat | wc -c
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PATH=input-files/perl-v5.14.2:$PATH; (yes "`seq 3000`" | head -c 2300M; echo ged) | PERL5LIB=input-files/perl-v5.14.2/lib input-files/perl-v5.14.2/perl `which parallel` -k --block 2G --pipe --recend ged cat | wc -c
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2411724804
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2411724804
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parallel: Warning: --blocksize >= 2G causes problems. Using 2G-1.
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parallel: Warning: --blocksize >= 2G causes problems. Using 2G-1.
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echo '**'
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echo '**'
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@ -30,52 +30,19 @@ See output with: tmux1.9 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
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seq 900 1000 | TMUX=tmux1.9 par_tmux
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seq 900 1000 | TMUX=tmux1.9 par_tmux
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See output with: tmux1.9 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
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See output with: tmux1.9 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
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0
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0
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seq 1000 1100 | TMUX=tmux1.9 par_tmux
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seq 1000 1006 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (2023 >= 2023) at input 0: 1007
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See output with: tmux1.9 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
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255
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0
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seq 1100 1200 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (2209 >= 2023) at input 0: 1100
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255
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seq 1200 1300 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (2409 >= 2023) at input 0: 1200
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255
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seq 1300 1400 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (2609 >= 2023) at input 0: 1300
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255
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seq 1400 1500 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (2809 >= 2023) at input 0: 1400
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255
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seq 1500 1600 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (3009 >= 2023) at input 0: 1500
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255
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seq 1600 1700 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (3209 >= 2023) at input 0: 1600
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255
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seq 1700 1800 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (3409 >= 2023) at input 0: 1700
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255
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seq 1800 1900 | TMUX=tmux1.9 par_tmux
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parallel: Error: Command line too long (3609 >= 2023) at input 0: 1800
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255
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seq 1900 2000 | TMUX=tmux1.9 par_tmux
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|
||||||
parallel: Error: Command line too long (3809 >= 2023) at input 0: 1900
|
|
||||||
255
|
|
||||||
seq 2000 2018 | TMUX=tmux1.9 par_tmux
|
|
||||||
parallel: Error: Command line too long (4009 >= 2023) at input 0: 2000
|
|
||||||
255
|
|
||||||
echo '### tmux1.9 fails'
|
echo '### tmux1.9 fails'
|
||||||
### tmux1.9 fails
|
### tmux1.9 fails
|
||||||
echo 2019 | TMUX=tmux1.9 par_tmux
|
echo 1007 | TMUX=tmux1.9 par_tmux
|
||||||
parallel: Error: Command line too long (4047 >= 2023) at input 0: 2019
|
parallel: Error: Command line too long (2023 >= 2023) at input 0: 1007
|
||||||
255
|
255
|
||||||
echo 2020 | TMUX=tmux1.9 par_tmux
|
echo 1008 | TMUX=tmux1.9 par_tmux
|
||||||
parallel: Error: Command line too long (4049 >= 2023) at input 0: 2020
|
parallel: Error: Command line too long (2025 >= 2023) at input 0: 1008
|
||||||
255
|
255
|
||||||
echo 2021 | TMUX=tmux1.9 par_tmux
|
echo 1009 | TMUX=tmux1.9 par_tmux
|
||||||
parallel: Error: Command line too long (4051 >= 2023) at input 0: 2021
|
parallel: Error: Command line too long (2027 >= 2023) at input 0: 1009
|
||||||
255
|
|
||||||
echo 2022 | TMUX=tmux1.9 par_tmux
|
|
||||||
parallel: Error: Command line too long (4053 >= 2023) at input 0: 2022
|
|
||||||
255
|
255
|
||||||
echo '### tmux1.8'
|
echo '### tmux1.8'
|
||||||
### tmux1.8
|
### tmux1.8
|
||||||
|
|
@ -85,38 +52,24 @@ See output with: tmux1.8 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
|
||||||
seq 51 100 | TMUX=tmux1.8 par_tmux
|
seq 51 100 | TMUX=tmux1.8 par_tmux
|
||||||
See output with: tmux1.8 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
|
See output with: tmux1.8 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
|
||||||
0
|
0
|
||||||
seq 101 150 | TMUX=tmux1.8 par_tmux
|
seq 101 113 | TMUX=tmux1.8 par_tmux
|
||||||
See output with: tmux1.8 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
|
See output with: tmux1.8 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
|
||||||
parallel: Error: Command line too long (236 >= 236) at input 0: 114
|
0
|
||||||
255
|
|
||||||
seq 151 200 | TMUX=tmux1.8 par_tmux
|
|
||||||
parallel: Error: Command line too long (310 >= 236) at input 0: 151
|
|
||||||
255
|
|
||||||
seq 201 231 | TMUX=tmux1.8 par_tmux
|
|
||||||
parallel: Error: Command line too long (410 >= 236) at input 0: 201
|
|
||||||
255
|
|
||||||
echo '### tmux1.8 fails'
|
echo '### tmux1.8 fails'
|
||||||
### tmux1.8 fails
|
### tmux1.8 fails
|
||||||
echo 232 | TMUX=tmux1.8 par_tmux
|
echo 114 | TMUX=tmux1.8 par_tmux
|
||||||
parallel: Error: Command line too long (472 >= 236) at input 0: 232
|
parallel: Error: Command line too long (236 >= 236) at input 0: 114
|
||||||
255
|
255
|
||||||
echo 233 | TMUX=tmux1.8 par_tmux
|
echo 115 | TMUX=tmux1.8 par_tmux
|
||||||
parallel: Error: Command line too long (474 >= 236) at input 0: 233
|
parallel: Error: Command line too long (238 >= 236) at input 0: 115
|
||||||
255
|
255
|
||||||
echo 234 | TMUX=tmux1.8 par_tmux
|
echo 116 | TMUX=tmux1.8 par_tmux
|
||||||
parallel: Error: Command line too long (476 >= 236) at input 0: 234
|
parallel: Error: Command line too long (240 >= 236) at input 0: 116
|
||||||
255
|
|
||||||
echo 235 | TMUX=tmux1.8 par_tmux
|
|
||||||
parallel: Error: Command line too long (478 >= 236) at input 0: 235
|
|
||||||
255
|
|
||||||
echo 236 | TMUX=tmux1.8 par_tmux
|
|
||||||
parallel: Error: Command line too long (480 >= 236) at input 0: 236
|
|
||||||
255
|
255
|
||||||
echo '### tmux1.8 0..255 ascii'
|
echo '### tmux1.8 0..255 ascii'
|
||||||
### tmux1.8 0..255 ascii
|
### tmux1.8 0..255 ascii
|
||||||
perl -e 'print map { ($_, map { pack("c*",$_) } grep { $_>=1 && $_!=10 } 0..$_),"\n" } 0..255' | TMUX=tmux1.8 stdout parallel --tmux --timeout 3 echo | par_tmux_filter; echo $?
|
perl -e 'print map { ($_, map { pack("c*",$_) } grep { $_>=1 && $_!=10 } $_-110..$_),"\n" } 0..255' | TMUX=tmux1.8 stdout parallel --tmux --timeout 3 echo | par_tmux_filter; echo $?
|
||||||
See output with: tmux1.8 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
|
See output with: tmux1.8 -S /tmp/parallel-local7-tmpdir/tmsXXXXX attach
|
||||||
parallel: Error: Command line too long (236 >= 236) at input 0: 155
!"#$%&'()*+,-./0...
|
|
||||||
0
|
0
|
||||||
echo '### tmux1.9 0..255 ascii'
|
echo '### tmux1.9 0..255 ascii'
|
||||||
### tmux1.9 0..255 ascii
|
### tmux1.9 0..255 ascii
|
||||||
|
|
|
||||||
Loading…
Reference in a new issue