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Fixed bug #46016: --joblog should not log when --dryrun.

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This commit is contained in:
Ole Tange 2015-09-22 01:35:52 +02:00
parent 5b7d5ee32a
commit d3b5e26c1a
7 changed files with 35 additions and 40 deletions
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4
NEWS
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@ -11,7 +11,7 @@ Multi-Objective Optimization on GPUs http://ieeexplore.ieee.org/stamp/stamp.jsp?
* GNU Parallel was cited in: Tools and techniques for computational reproducibility http://biorxiv.org/content/biorxiv/early/2015/07/17/022707.full.pdf * GNU Parallel was cited in: Tools and techniques for computational reproducibility http://biorxiv.org/content/biorxiv/early/2015/07/17/022707.full.pdf
* GNU Parallel was cited in: How Can We Measure the Similarity Between Résumés of Selected Candidates for a Job? http://crawl.prod.proquest.com.s3.amazonaws.com/fpcache/c79b355e6e441a51de3c7fcd52866184.pdf?AWSAccessKeyId=AKIAJF7V7KNV2KKY2NUQ&Expires=1442658364&Signature=soRDi6Xqw1zHhSmBrqJ5KiD%2B8Sw%3D * GNU Parallel was cited in: How Can We Measure the Similarity Between Résumés of Selected Candidates for a Job? http://www.researchgate.net/publication/275954089_How_can_we_measure_the_similarity_between_rsums_of_selected_candidates_for_a_job
* GNU Parallel was cited in: Interplay of cell dynamics and epithelial tension during morphogenesis of the Drosophila pupal wing http://www.researchgate.net/profile/Raphael_Etournay/publication/279061859_Interplay_of_cell_dynamics_and_epithelial_tension_during_morphogenesis_of_the_Drosophila_pupal_wing/links/558a95ad08aeae8413bcceea.pdf * GNU Parallel was cited in: Interplay of cell dynamics and epithelial tension during morphogenesis of the Drosophila pupal wing http://www.researchgate.net/profile/Raphael_Etournay/publication/279061859_Interplay_of_cell_dynamics_and_epithelial_tension_during_morphogenesis_of_the_Drosophila_pupal_wing/links/558a95ad08aeae8413bcceea.pdf
@ -25,8 +25,6 @@ Multi-Objective Optimization on GPUs http://ieeexplore.ieee.org/stamp/stamp.jsp?
* What It Looks Like to Process 3.5 Million Books http://blog.gdeltproject.org/what-it-looks-like-to-process-3-5-million-books/ * What It Looks Like to Process 3.5 Million Books http://blog.gdeltproject.org/what-it-looks-like-to-process-3-5-million-books/
* L’Exploration De Données Twitter http://blog.inovia-conseil.fr/?p=233
* Bug fixes and man page updates. * Bug fixes and man page updates.

33
doc/release_new_version
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@ -4,7 +4,7 @@
Check that documentation is updated (compare to web): Check that documentation is updated (compare to web):
Fixet for 20150722 Fixet for 20150922
git diff last-release-commit git diff last-release-commit
Unmodified beta since last version => production Unmodified beta since last version => production
Unmodified alpha since last version => beta Unmodified alpha since last version => beta
@ -212,9 +212,9 @@ cc:Tim Cuthbertson <tim3d.junk@gmail.com>,
Ryoichiro Suzuki <ryoichiro.suzuki@gmail.com>, Ryoichiro Suzuki <ryoichiro.suzuki@gmail.com>,
Jesse Alama <jesse.alama@gmail.com> Jesse Alama <jesse.alama@gmail.com>
Subject: GNU Parallel 20150822 ('Aylan Kurdi') released <<[stable]>> Subject: GNU Parallel 20151022 ('<<>>') released <<[stable]>>
GNU Parallel 20150922 ('Aylan Kurdi') <<[stable]>> has been released. It is available for download at: http://ftp.gnu.org/gnu/parallel/ GNU Parallel 20151022 ('<<>>') <<[stable]>> has been released. It is available for download at: http://ftp.gnu.org/gnu/parallel/
<<No new functionality was introduced so this is a good candidate for a stable release.>> <<No new functionality was introduced so this is a good candidate for a stable release.>>
@ -225,21 +225,6 @@ Haiku of the month:
New in this release: New in this release:
* GNU Parallel was cited in: Flexible Modeling of Epidemics with an Empirical Bayes Framework http://journals.plos.org/ploscompbiol/article?id=10.1371%2Fjournal.pcbi.1004382
* GNU Parallel was cited in: BL1: 2D Potts Model with a Twist https://sucs.swan.ac.uk/~rjames93/Dissertation.pdf
* GNU Parallel was cited in: DockBench: An Integrated Informatic Platform Bridging the Gap between the Robust Validation of Docking Protocols and Virtual Screening Simulations http://www.mdpi.com/1420-3049/20/6/9977/pdf
* GNU Parallel was cited in: A Scalable Parallel Implementation of Evolutionary Algorithms for
Multi-Objective Optimization on GPUs http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=7257074
* GNU Parallel was cited in: Tools and techniques for computational reproducibility http://biorxiv.org/content/biorxiv/early/2015/07/17/022707.full.pdf
* GNU Parallel was cited in: How Can We Measure the Similarity Between Résumés of Selected Candidates for a Job? http://crawl.prod.proquest.com.s3.amazonaws.com/fpcache/c79b355e6e441a51de3c7fcd52866184.pdf?AWSAccessKeyId=AKIAJF7V7KNV2KKY2NUQ&Expires=1442658364&Signature=soRDi6Xqw1zHhSmBrqJ5KiD%2B8Sw%3D
* GNU Parallel was cited in: Interplay of cell dynamics and epithelial tension during morphogenesis of the Drosophila pupal wing http://www.researchgate.net/profile/Raphael_Etournay/publication/279061859_Interplay_of_cell_dynamics_and_epithelial_tension_during_morphogenesis_of_the_Drosophila_pupal_wing/links/558a95ad08aeae8413bcceea.pdf
* << kontakt GNU Parallel was used (unfortunately without citation) in: Instrumentation and Trace Analysis for Ad-hoc Python Workflows in Cloud Environments http://ieeexplore.ieee.org/xpl/articleDetails.jsp?arnumber=7214035>> * << kontakt GNU Parallel was used (unfortunately without citation) in: Instrumentation and Trace Analysis for Ad-hoc Python Workflows in Cloud Environments http://ieeexplore.ieee.org/xpl/articleDetails.jsp?arnumber=7214035>>
* <<Har angiveligt submittet ny version - afventer opdatering>> GNU Parallel was used (unfortunately without citation) in: MUGBAS: a species free gene-based programme suite for post-GWAS analysis http://www.ncbi.nlm.nih.gov/pubmed/25765345 * <<Har angiveligt submittet ny version - afventer opdatering>> GNU Parallel was used (unfortunately without citation) in: MUGBAS: a species free gene-based programme suite for post-GWAS analysis http://www.ncbi.nlm.nih.gov/pubmed/25765345
@ -248,18 +233,6 @@ Multi-Objective Optimization on GPUs http://ieeexplore.ieee.org/stamp/stamp.jsp?
* <<kontaktet 2015-06-22 Afventer svar fra journal>> GNU Parallel was used (unfortunately with wrong citation) in: TADSim: Discrete Event-Based Performance Prediction for Temperature-Accelerated Dynamics http://vruehle.de/publications/2015c.pdf * <<kontaktet 2015-06-22 Afventer svar fra journal>> GNU Parallel was used (unfortunately with wrong citation) in: TADSim: Discrete Event-Based Performance Prediction for Temperature-Accelerated Dynamics http://vruehle.de/publications/2015c.pdf
* Third-party selling GNU Parallel T-shirts http://www.aliexpress.com/item/2015F-BSO-GNU-LOGO-GNU-PARALLEL-men-s-shirt-sleeve-visual-illusion-error/32464827966.html
* Joys of gnu parallel http://scottolesen.com/index.php/2015/08/26/joys-of-gnu-parallel/
* Crop and resize images with bash and ImageMagick https://www.simonholywell.com/post/2015/08/image-resize-crop-bash-imagemagick/
* Three Ways to Script Processes in Parallel http://www.codeword.xyz/2015/09/02/three-ways-to-script-processes-in-parallel/
* What It Looks Like to Process 3.5 Million Books http://blog.gdeltproject.org/what-it-looks-like-to-process-3-5-million-books/
* L’Exploration De Données Twitter http://blog.inovia-conseil.fr/?p=233
* Bug fixes and man page updates. * Bug fixes and man page updates.
GNU Parallel - For people who live life in the parallel lane. GNU Parallel - For people who live life in the parallel lane.

10
src/parallel
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@ -1097,7 +1097,7 @@ sub parse_options {
sub init_globals { sub init_globals {
# Defaults: # Defaults:
$Global::version = 20150922; $Global::version = 20150923;
$Global::progname = 'parallel'; $Global::progname = 'parallel';
$Global::infinity = 2**31; $Global::infinity = 2**31;
$Global::debug = 0; $Global::debug = 0;
@ -1430,7 +1430,13 @@ sub open_joblog {
::wait_and_exit(255); ::wait_and_exit(255);
} }
} else { } else {
if($opt::joblog eq "-") { if($opt::dryrun) {
# Do not write to joblog in a dry-run
if(not open($Global::joblog, ">", "/dev/null")) {
::error("Cannot write to --joblog $opt::joblog.");
::wait_and_exit(255);
}
} elsif($opt::joblog eq "-") {
# Use STDOUT as joblog # Use STDOUT as joblog
$Global::joblog = $Global::fd{1}; $Global::joblog = $Global::fd{1};
} elsif(not open($Global::joblog, ">", $opt::joblog)) { } elsif(not open($Global::joblog, ">", $opt::joblog)) {

8
testsuite/tests-to-run/parallel-freebsd.sh
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@ -11,10 +11,10 @@ scp -q .*/src/{parallel,sem,sql,niceload} freebsd7.tange.dk:bin/
cat <<'EOF' | sed -e 's/;$/; /;s/$SERVER1/'$SERVER1'/;s/$SERVER2/'$SERVER2'/' | stdout parallel -vj9 -k --joblog /tmp/jl-`basename $0` -L1 -S freebsd7.tange.dk cat <<'EOF' | sed -e 's/;$/; /;s/$SERVER1/'$SERVER1'/;s/$SERVER2/'$SERVER2'/' | stdout parallel -vj9 -k --joblog /tmp/jl-`basename $0` -L1 -S freebsd7.tange.dk
echo 'bug #40136: FreeBSD: No more processes' echo 'bug #40136: FreeBSD: No more processes'
sem --jobs 3 --id my_id -u 'echo First started; sleep 5; echo The first finished' && sem --jobs 3 --id my_id -u 'echo First started; sleep 10; echo The first finished;echo' &&
sem --jobs 3 --id my_id -u 'echo Second started; sleep 6; echo The second finished' && sem --jobs 3 --id my_id -u 'echo Second started; sleep 11; echo The second finished;echo' &&
sem --jobs 3 --id my_id -u 'echo Third started; sleep 7; echo The third finished' && sem --jobs 3 --id my_id -u 'echo Third started; sleep 12; echo The third finished;echo' &&
sem --jobs 3 --id my_id -u 'echo Fourth started; sleep 8; echo The fourth finished' && sem --jobs 3 --id my_id -u 'echo Fourth started; sleep 13; echo The fourth finished;echo' &&
sem --wait --id my_id sem --wait --id my_id
echo 'Test --compress --pipe' echo 'Test --compress --pipe'

6
testsuite/tests-to-run/parallel-local-0.3s.sh
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@ -211,6 +211,12 @@ echo '**'
echo '### bug #45998: --pipe to function broken' echo '### bug #45998: --pipe to function broken'
myfunc() { echo $1; cat; }; export -f myfunc; echo OK | parallel --pipe myfunc {#} myfunc() { echo $1; cat; }; export -f myfunc; echo OK | parallel --pipe myfunc {#}
echo '**'
echo 'bug #46016: --joblog should not log when --dryrun'
parallel --dryrun --joblog - echo ::: Only_this
echo '**'
EOF EOF
echo '### 1 .par file from --files expected' echo '### 1 .par file from --files expected'

6
testsuite/wanted-results/parallel-freebsd
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@ -2,15 +2,19 @@
tange@freebsd7 tange@freebsd7
echo 'bug #40136: FreeBSD: No more processes' echo 'bug #40136: FreeBSD: No more processes'
bug #40136: FreeBSD: No more processes bug #40136: FreeBSD: No more processes
sem --jobs 3 --id my_id -u 'echo First started; sleep 5; echo The first finished' && sem --jobs 3 --id my_id -u 'echo Second started; sleep 6; echo The second finished' && sem --jobs 3 --id my_id -u 'echo Third started; sleep 7; echo The third finished' && sem --jobs 3 --id my_id -u 'echo Fourth started; sleep 8; echo The fourth finished' && sem --wait --id my_id sem --jobs 3 --id my_id -u 'echo First started; sleep 10; echo The first finished;echo' && sem --jobs 3 --id my_id -u 'echo Second started; sleep 11; echo The second finished;echo' && sem --jobs 3 --id my_id -u 'echo Third started; sleep 12; echo The third finished;echo' && sem --jobs 3 --id my_id -u 'echo Fourth started; sleep 13; echo The fourth finished;echo' && sem --wait --id my_id
First started First started
Second started Second started
Third started Third started
The first finished The first finished
Fourth started Fourth started
The second finished The second finished
The third finished The third finished
The fourth finished The fourth finished
echo 'Test --compress --pipe' echo 'Test --compress --pipe'
Test --compress --pipe Test --compress --pipe
jot 1000 | parallel --compress --pipe cat | wc jot 1000 | parallel --compress --pipe cat | wc

8
testsuite/wanted-results/parallel-local-0.3s
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@ -443,5 +443,13 @@ echo '### bug #45998: --pipe to function broken'
myfunc() { echo $1; cat; }; export -f myfunc; echo OK | parallel --pipe myfunc {#} myfunc() { echo $1; cat; }; export -f myfunc; echo OK | parallel --pipe myfunc {#}
1 1
OK OK
echo '**'
**
echo 'bug #46016: --joblog should not log when --dryrun'
bug #46016: --joblog should not log when --dryrun
parallel --dryrun --joblog - echo ::: Only_this
echo Only_this
echo '**'
**
### 1 .par file from --files expected ### 1 .par file from --files expected
1 1