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parallel: ETA format changed. SHM+joblog testsuite fixed.
This commit is contained in:
Ole Tange
parent
4ef63ba2e1
commit
e014e33743
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@ -204,24 +204,42 @@ cc:Sandro Cazzaniga <kharec@mandriva.org>,
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Ryoichiro Suzuki <ryoichiro.suzuki@gmail.com>,
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Jesse Alama <jesse.alama@gmail.com>
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Subject: GNU Parallel 20140222 ('Sochi') released
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Subject: GNU Parallel 20140222 ('Со́чи') released
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GNU Parallel 20140222 ('Sochi') has been released. It is available for download at: http://ftp.gnu.org/gnu/parallel/
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GNU Parallel 20140222 ('Со́чи') has been released. It is available for download at: http://ftp.gnu.org/gnu/parallel/
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The --compress change is so big that this release is of alpha quality.
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New in this release:
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* --tollef has been retired.
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* --compress has be redesigned due to bugs.
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* GNU Parallel was cited in: Speaker Verification and Keyword Spotting
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Systems for Forensic Applications
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http://lantana.tenet.res.in/website_files/thesis/Phd/srikanth.pdf
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* GNU Parallel was used (unfortunately without citation) in:
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Performance and Energy Efficiency of Common Compression /
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Decompression Utilities
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http://www.researchgate.net/publication/243962643_Performance_and_Energy_Efficiency_of_Common_CompressionDecompression_Utilities_An_Experimental_Study_in_Mobile_and_Workstation_Computer_Platforms/file/3deec51d1dbc0474f9.pdf
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* GNU Parallel is co-distributed with RepeatExplorer
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http://www.vcru.wisc.edu/simonlab/bioinformatics/programs/repeatexplorer/README.txt
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* Convert MP3 to a scrolling spectrum waterfall plot video
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http://jdesbonnet.blogspot.dk/2014/02/convert-mp3-to-scrolling-spectrum.html
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* PHP wrapper class for the GNU Parallel tool
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https://github.com/geopal-solutions/gnu-parallel-wrapper/tree/master
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* Single-Thread-Programme auf Multicore-Rechnern parallelisieren
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http://www.adlerweb.info/blog/2014/02/08/linux-single-thread-programme-auf-multicore-rechnern-parallelisieren
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* Распараллеливаем процессы для ускорения вычислений и выполнения заданий в Linux
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http://savepearlharbor.com/?p=210480
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* Bug fixes and man page updates.
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@ -1624,7 +1624,7 @@ sub progress {
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} else {
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$this_eta = $Private::last_eta;
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}
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$eta = sprintf("ETA: %ds %dleft %.2favg ", $this_eta, $left, $avgtime);
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$eta = sprintf("ETA: %ds Left: %d AVG: %.2fs ", $this_eta, $left, $avgtime);
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if($opt::bar) {
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my $arg = $Global::newest_job ?
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$Global::newest_job->{'commandline'}->simple_replace_placeholders($Global::replace{"{}"}) : "";
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@ -3,6 +3,13 @@
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# Simple jobs that never fails
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# Each should be taking 30-100s and be possible to run in parallel
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# I.e.: No race conditions, no logins
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# Assume /tmp/shm is easy to fill up
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export SHM=/tmp/shm/parallel
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mkdir -p $SHM
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sudo umount -l $SHM
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sudo mount -t tmpfs -o size=10% none $SHM
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cat <<'EOF' | sed -e 's/;$/; /;s/$SERVER1/'$SERVER1'/;s/$SERVER2/'$SERVER2'/' | stdout parallel -k -j4 -L1
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echo '### Test race condition on 8 CPU (my laptop)';
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seq 1 5000000 > /tmp/parallel_test;
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@ -11,7 +18,7 @@ echo '### Test race condition on 8 CPU (my laptop)';
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echo '**'
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echo "### Test --tmpdir running full. bug #40733 was caused by this"
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stdout parallel -j1 --tmpdir /run/shm cat /dev/zero ::: dummy
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stdout parallel -j1 --tmpdir $SHM cat /dev/zero ::: dummy
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echo '**'
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@ -143,7 +143,7 @@ echo '### Test {#}'
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seq 1 10 | parallel -k echo {#}
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echo '### Test --seqreplace and line too long'
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seq 1 100 | stdout parallel -k --seqreplace I echo $(perl -e 'print "I"x130000') \|wc
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seq 1 100 | stdout parallel -k --seqreplace I echo $(perl -e 'print "I"x130000') \|wc | uniq
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echo '### bug #37042: -J foo is taken from the whole command line - not just the part before the command'
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echo '--tagstring foo' > ~/.parallel/bug_37042_profile;
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@ -1,25 +1,36 @@
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#!/bin/bash
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# Assume /dev/shm is easy to fill up
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mkdir -p /dev/shm/parallel
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SHM=/tmp/shm/parallel
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mkdir -p $SHM
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sudo umount -l $SHM
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sudo mount -t tmpfs -o size=10% none $SHM
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echo '3 x terminated is OK' >&2
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echo '### Test $TMPDIR'
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TMPDIR=/dev/shm/parallel stdout timeout -k 1 6 parallel head -c 2000m '<'{} >/dev/null ::: /dev/zero &
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seq 1 200 | parallel -j1 "df /dev/shm | parallel -k --colsep ' +' echo {4}|tail -n 1;sleep 0.1" \
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| stdout timeout -k 1 10 perl -ne 'BEGIN{$a=<>} $b=<>; if ($a-1000 > $b) { print "More than 1 MB gone. Good!\n"; exit }'
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TMPDIR=$SHM stdout timeout -k 1 6 parallel pv -qL10m {} ::: /dev/zero >/dev/null &
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PID=$!
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seq 1 200 | parallel -j1 "df $SHM | parallel -k --colsep ' +' echo {4}|tail -n 1;sleep 0.1" \
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| stdout timeout -k 1 10 perl -ne 'BEGIN{$a=<>} $b=<>;
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if ($a-1000 > $b) { print "More than 1 MB gone. Good!\n";exit }'
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kill $PID
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wait
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sleep 0.1
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echo '### Test --tmpdir'
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stdout timeout -k 1 6 parallel --tmpdir /dev/shm/parallel head -c 2000m '<'{} >/dev/null ::: /dev/zero &
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seq 1 200 | parallel -j1 "df /dev/shm | parallel -k --colsep ' +' echo {4}|tail -n 1;sleep 0.1" \
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stdout timeout -k 1 6 parallel --tmpdir $SHM pv -qL10m {} ::: /dev/zero >/dev/null &
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PID=$!
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seq 1 200 | parallel -j1 "df $SHM | parallel -k --colsep ' +' echo {4}|tail -n 1;sleep 0.1" \
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| stdout timeout -k 1 10 perl -ne 'BEGIN{$a=<>} $b=<>; if ($a-1000 > $b) { print "More than 1 MB gone. Good!\n"; exit }'
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kill $PID
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wait
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sleep 0.1
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echo '### Test $TMPDIR and --tmpdir'
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TMPDIR=/tmp stdout timeout -k 1 6 parallel --tmpdir /dev/shm/parallel head -c 2000m '<'{} >/dev/null ::: /dev/zero &
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seq 1 200 | parallel -j1 "df /dev/shm | parallel -k --colsep ' +' echo {4}|tail -n 1;sleep 0.1" \
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TMPDIR=/tmp stdout timeout -k 1 6 parallel --tmpdir $SHM pv -qL10m {} ::: /dev/zero >/dev/null &
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PID=$!
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seq 1 200 | parallel -j1 "df $SHM | parallel -k --colsep ' +' echo {4}|tail -n 1;sleep 0.1" \
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| stdout timeout -k 1 10 perl -ne 'BEGIN{$a=<>} $b=<>; if ($a-1000 > $b) { print "More than 1 MB gone. Good!\n"; exit }'
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kill $PID
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wait
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sleep 0.1
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@ -258,7 +258,6 @@ o
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10
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### Test --seqreplace and line too long
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1 1 130001
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1 1 130001
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parallel: Error: Command line too long (260009 >= 131071) at number 9: 10...
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### bug #37042: -J foo is taken from the whole command line - not just the part before the command
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foo tag_with_foo
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@ -90,14 +90,14 @@ echo '### -l -n with pipe'
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echo '### bug #39360: --joblog does not work with --pipe'
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### bug #39360: --joblog does not work with --pipe
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seq 100 | parallel --joblog - --pipe wc | tr '0-9' 'X'
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Seq Host Starttime Runtime Send Receive Exitval Signal Command
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X : XXXXXXXXXX.XXX X.XXX X X X X wc
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Seq Host Starttime JobRuntime Send Receive Exitval Signal Command
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X : XXXXXXXXXX.XXX X.XXX X X X X wc
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XXX XXX XXX
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echo '### bug #39572: --tty and --joblog do not work'
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### bug #39572: --tty and --joblog do not work
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seq 1 | parallel --joblog - -u true | tr '0-9' 'X'
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Seq Host Starttime Runtime Send Receive Exitval Signal Command
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X : XXXXXXXXXX.XXX X.XXX X X X X true X
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Seq Host Starttime JobRuntime Send Receive Exitval Signal Command
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X : XXXXXXXXXX.XXX X.XXX X X X X true X
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echo '### How do we deal with missing $HOME'
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### How do we deal with missing $HOME
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unset HOME; stdout perl -w $(which parallel) -k echo ::: 1 2 3
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