From e49dd0d5d0ecb212512af885dbafdb80e3ab56e0 Mon Sep 17 00:00:00 2001 From: Ole Tange Date: Sat, 22 Apr 2017 23:23:24 +0200 Subject: [PATCH] =?UTF-8?q?Released=20as=2020170422=20('=D0=A1=D0=B0=D0=BD?= =?UTF-8?q?=D0=BA=D1=82-=D0=9F=D0=B5=D1=82=D0=B5=D1=80=D0=B1=D1=83=CC=81?= =?UTF-8?q?=D1=80=D0=B3')?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- NEWS | 43 +++++++++++++++++++ README | 12 +++--- configure | 20 ++++----- configure.ac | 2 +- doc/release_new_version | 5 ++- packager/obs/home:tange/parallel/.osc/_files | 10 ++--- .../home:tange/parallel/.osc/parallel.spec | 9 ++-- .../obs/home:tange/parallel/parallel.spec | 9 ++-- src/niceload | 2 +- src/parallel | 2 +- src/sql | 2 +- 11 files changed, 84 insertions(+), 32 deletions(-) diff --git a/NEWS b/NEWS index 292a86d8..c1081ff2 100644 --- a/NEWS +++ b/NEWS @@ -1,3 +1,46 @@ +20170422 + +* --halt supports done in addition to success and fail. + +* parset will set variables in parallel in Bash. + +* Perl 5.6 on Irix is no longer supported. + +* Vote for GNU Parallel's community ads on + http://meta.unix.stackexchange.com/a/4356/2972 + http://meta.askubuntu.com/a/16750/22307 + http://meta.serverfault.com/a/9040/45704 + +* GNU Parallel was cited in: Halvade-RNA: Parallel variant calling + from transcriptomic data using MapReduce + http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0174575 + +* GNU Parallel was cited in: StrAuto: automation and parallelization + of STRUCTURE analysis + http://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1593-0 + +* GNU Parallel was cited in: Trespassing the Boundaries: Labeling + Temporal Bounds for Object Interactions in Egocentric Video + https://128.84.21.199/pdf/1703.09026.pdf + +* GNU Parallel is used in: https://github.com/lucascbeyeler/zmbackup + +* Using GNU Parallel + https://wiki.ncsa.illinois.edu/display/ROGER/Using+GNU+Parallel + +* Find and xargs and parallel + http://helpful.knobs-dials.com/index.php/Find_and_xargs_and_parallel#Parallel + +* Quick Introduction to GNU Parallel + https://github.com/mlangill/microbiome_helper/wiki/Quick-Introduction-to-GNU-Parallel + +* Data science at the command line https://www.slideshare.net/sharatsc/data-science-at-the-command-line + +* Bedtools笔记 http://www.jianshu.com/p/67b0665490ac + +* Bug fixes and man page updates. + + 20170322 * --rpl can now take arguments by adding '(regexp)' in the replacement diff --git a/README b/README index 53ae4be1..003e969c 100644 --- a/README +++ b/README @@ -44,9 +44,9 @@ document. Full installation of GNU Parallel is as simple as: - wget http://ftpmirror.gnu.org/parallel/parallel-20170322.tar.bz2 - bzip2 -dc parallel-20170322.tar.bz2 | tar xvf - - cd parallel-20170322 + wget http://ftpmirror.gnu.org/parallel/parallel-20170422.tar.bz2 + bzip2 -dc parallel-20170422.tar.bz2 | tar xvf - + cd parallel-20170422 ./configure && make && sudo make install @@ -55,9 +55,9 @@ Full installation of GNU Parallel is as simple as: If you are not root you can add ~/bin to your path and install in ~/bin and ~/share: - wget http://ftpmirror.gnu.org/parallel/parallel-20170322.tar.bz2 - bzip2 -dc parallel-20170322.tar.bz2 | tar xvf - - cd parallel-20170322 + wget http://ftpmirror.gnu.org/parallel/parallel-20170422.tar.bz2 + bzip2 -dc parallel-20170422.tar.bz2 | tar xvf - + cd parallel-20170422 ./configure --prefix=$HOME && make && make install Or if your system lacks 'make' you can simply copy src/parallel diff --git a/configure b/configure index e3318050..7c13e46a 100755 --- a/configure +++ b/configure @@ -1,6 +1,6 @@ #! /bin/sh # Guess values for system-dependent variables and create Makefiles. -# Generated by GNU Autoconf 2.69 for parallel 20170322. +# Generated by GNU Autoconf 2.69 for parallel 20170422. # # Report bugs to . # @@ -579,8 +579,8 @@ MAKEFLAGS= # Identity of this package. PACKAGE_NAME='parallel' PACKAGE_TARNAME='parallel' -PACKAGE_VERSION='20170322' -PACKAGE_STRING='parallel 20170322' +PACKAGE_VERSION='20170422' +PACKAGE_STRING='parallel 20170422' PACKAGE_BUGREPORT='bug-parallel@gnu.org' PACKAGE_URL='' @@ -1214,7 +1214,7 @@ if test "$ac_init_help" = "long"; then # Omit some internal or obsolete options to make the list less imposing. # This message is too long to be a string in the A/UX 3.1 sh. cat <<_ACEOF -\`configure' configures parallel 20170322 to adapt to many kinds of systems. +\`configure' configures parallel 20170422 to adapt to many kinds of systems. Usage: $0 [OPTION]... [VAR=VALUE]... @@ -1281,7 +1281,7 @@ fi if test -n "$ac_init_help"; then case $ac_init_help in - short | recursive ) echo "Configuration of parallel 20170322:";; + short | recursive ) echo "Configuration of parallel 20170422:";; esac cat <<\_ACEOF @@ -1357,7 +1357,7 @@ fi test -n "$ac_init_help" && exit $ac_status if $ac_init_version; then cat <<\_ACEOF -parallel configure 20170322 +parallel configure 20170422 generated by GNU Autoconf 2.69 Copyright (C) 2012 Free Software Foundation, Inc. @@ -1374,7 +1374,7 @@ cat >config.log <<_ACEOF This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. -It was created by parallel $as_me 20170322, which was +It was created by parallel $as_me 20170422, which was generated by GNU Autoconf 2.69. Invocation command line was $ $0 $@ @@ -2237,7 +2237,7 @@ fi # Define the identity of the package. PACKAGE='parallel' - VERSION='20170322' + VERSION='20170422' cat >>confdefs.h <<_ACEOF @@ -2880,7 +2880,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1 # report actual input values of CONFIG_FILES etc. instead of their # values after options handling. ac_log=" -This file was extended by parallel $as_me 20170322, which was +This file was extended by parallel $as_me 20170422, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = $CONFIG_FILES @@ -2942,7 +2942,7 @@ _ACEOF cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1 ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`" ac_cs_version="\\ -parallel config.status 20170322 +parallel config.status 20170422 configured by $0, generated by GNU Autoconf 2.69, with options \\"\$ac_cs_config\\" diff --git a/configure.ac b/configure.ac index b6b3c85e..914ab78e 100644 --- a/configure.ac +++ b/configure.ac @@ -1,4 +1,4 @@ -AC_INIT([parallel], [20170322], [bug-parallel@gnu.org]) +AC_INIT([parallel], [20170422], [bug-parallel@gnu.org]) AM_INIT_AUTOMAKE([-Wall -Werror foreign]) AC_CONFIG_HEADERS([config.h]) AC_CONFIG_FILES([ diff --git a/doc/release_new_version b/doc/release_new_version index 5e2c7a98..c876b8af 100644 --- a/doc/release_new_version +++ b/doc/release_new_version @@ -109,6 +109,9 @@ http://www.gnu.org/software/parallel/ http://www.gnu.org/software/parallel/man.html http://www.gnu.org/software/parallel/sql.html http://www.gnu.org/software/parallel/sem.html +http://www.gnu.org/software/parallel/env_parallel.html +http://www.gnu.org/software/parallel/parset.html +http://www.gnu.org/software/parallel/parcat.html http://www.gnu.org/software/parallel/niceload.html cp src/*.pdf src/*.html ../parallel-web/parallel @@ -195,7 +198,7 @@ to:parallel@gnu.org, bug-parallel@gnu.org Subject: GNU Parallel 20170422 ('Санкт-Петербу́рг') released <<[stable]>> -GNU Parallel 20170422 ('Paris/Stockholm/London/Санкт-Петербу́рг') <<[stable]>> has been released. It is available for download at: http://ftpmirror.gnu.org/parallel/ +GNU Parallel 20170422 ('Санкт-Петербу́рг') <<[stable]>> has been released. It is available for download at: http://ftpmirror.gnu.org/parallel/ <> diff --git a/packager/obs/home:tange/parallel/.osc/_files b/packager/obs/home:tange/parallel/.osc/_files index f690f6b1..715e1d3d 100644 --- a/packager/obs/home:tange/parallel/.osc/_files +++ b/packager/obs/home:tange/parallel/.osc/_files @@ -1,6 +1,6 @@ - - - - - + + + + + diff --git a/packager/obs/home:tange/parallel/.osc/parallel.spec b/packager/obs/home:tange/parallel/.osc/parallel.spec index 1762afb8..e989b505 100644 --- a/packager/obs/home:tange/parallel/.osc/parallel.spec +++ b/packager/obs/home:tange/parallel/.osc/parallel.spec @@ -1,8 +1,8 @@ Summary: Shell tool for executing jobs in parallel Name: parallel -Version: 20170322 -Release: 1.1 +Version: 20170422 +Release: 1.2 License: GPL Group: Productivity/File utilities URL: ftp://ftp.gnu.org/gnu/parallel @@ -65,6 +65,7 @@ rm $RPM_BUILD_ROOT%{_docdir}/niceload.html rm $RPM_BUILD_ROOT%{_docdir}/sem.html rm $RPM_BUILD_ROOT%{_docdir}/sql.html rm $RPM_BUILD_ROOT%{_docdir}/parcat.html +rm $RPM_BUILD_ROOT%{_docdir}/parset.html rm $RPM_BUILD_ROOT%{_docdir}/parallel.texi rm $RPM_BUILD_ROOT%{_docdir}/env_parallel.texi rm $RPM_BUILD_ROOT%{_docdir}/parallel_tutorial.texi @@ -74,6 +75,7 @@ rm $RPM_BUILD_ROOT%{_docdir}/niceload.texi rm $RPM_BUILD_ROOT%{_docdir}/sem.texi rm $RPM_BUILD_ROOT%{_docdir}/sql.texi rm $RPM_BUILD_ROOT%{_docdir}/parcat.texi +rm $RPM_BUILD_ROOT%{_docdir}/parset.texi rm $RPM_BUILD_ROOT%{_docdir}/parallel.pdf rm $RPM_BUILD_ROOT%{_docdir}/env_parallel.pdf rm $RPM_BUILD_ROOT%{_docdir}/parallel_tutorial.pdf @@ -83,6 +85,7 @@ rm $RPM_BUILD_ROOT%{_docdir}/niceload.pdf rm $RPM_BUILD_ROOT%{_docdir}/sem.pdf rm $RPM_BUILD_ROOT%{_docdir}/sql.pdf rm $RPM_BUILD_ROOT%{_docdir}/parcat.pdf +rm $RPM_BUILD_ROOT%{_docdir}/parset.pdf %clean rm -rf $RPM_BUILD_ROOT @@ -92,7 +95,7 @@ rm -rf $RPM_BUILD_ROOT /usr/bin/* /usr/share/man/man1/* /usr/share/man/man7/* -%doc README NEWS src/parallel.html src/env_parallel.html src/parallel_tutorial.html src/parallel_design.html src/parallel_alternatives.html src/sem.html src/sql.html src/parcat.html src/niceload.html src/parallel.texi src/env_parallel.texi src/parallel_tutorial.texi src/parallel_design.texi src/parallel_alternatives.texi src/niceload.texi src/sem.texi src/sql.texi src/parcat.texi src/parallel.pdf src/env_parallel.pdf src/parallel_tutorial.pdf src/parallel_design.pdf src/parallel_alternatives.pdf src/niceload.pdf src/sem.pdf src/sql.pdf src/parcat.pdf +%doc README NEWS src/parallel.html src/env_parallel.html src/parallel_tutorial.html src/parallel_design.html src/parallel_alternatives.html src/sem.html src/sql.html src/parcat.html src/parset.html src/niceload.html src/parallel.texi src/env_parallel.texi src/parallel_tutorial.texi src/parallel_design.texi src/parallel_alternatives.texi src/niceload.texi src/sem.texi src/sql.texi src/parcat.texi src/parset.texi src/parallel.pdf src/env_parallel.pdf src/parallel_tutorial.pdf src/parallel_design.pdf src/parallel_alternatives.pdf src/niceload.pdf src/sem.pdf src/sql.pdf src/parcat.pdf src/parset.pdf %changelog * Sat Jan 22 2011 Ole Tange diff --git a/packager/obs/home:tange/parallel/parallel.spec b/packager/obs/home:tange/parallel/parallel.spec index 1762afb8..e989b505 100644 --- a/packager/obs/home:tange/parallel/parallel.spec +++ b/packager/obs/home:tange/parallel/parallel.spec @@ -1,8 +1,8 @@ Summary: Shell tool for executing jobs in parallel Name: parallel -Version: 20170322 -Release: 1.1 +Version: 20170422 +Release: 1.2 License: GPL Group: Productivity/File utilities URL: ftp://ftp.gnu.org/gnu/parallel @@ -65,6 +65,7 @@ rm $RPM_BUILD_ROOT%{_docdir}/niceload.html rm $RPM_BUILD_ROOT%{_docdir}/sem.html rm $RPM_BUILD_ROOT%{_docdir}/sql.html rm $RPM_BUILD_ROOT%{_docdir}/parcat.html +rm $RPM_BUILD_ROOT%{_docdir}/parset.html rm $RPM_BUILD_ROOT%{_docdir}/parallel.texi rm $RPM_BUILD_ROOT%{_docdir}/env_parallel.texi rm $RPM_BUILD_ROOT%{_docdir}/parallel_tutorial.texi @@ -74,6 +75,7 @@ rm $RPM_BUILD_ROOT%{_docdir}/niceload.texi rm $RPM_BUILD_ROOT%{_docdir}/sem.texi rm $RPM_BUILD_ROOT%{_docdir}/sql.texi rm $RPM_BUILD_ROOT%{_docdir}/parcat.texi +rm $RPM_BUILD_ROOT%{_docdir}/parset.texi rm $RPM_BUILD_ROOT%{_docdir}/parallel.pdf rm $RPM_BUILD_ROOT%{_docdir}/env_parallel.pdf rm $RPM_BUILD_ROOT%{_docdir}/parallel_tutorial.pdf @@ -83,6 +85,7 @@ rm $RPM_BUILD_ROOT%{_docdir}/niceload.pdf rm $RPM_BUILD_ROOT%{_docdir}/sem.pdf rm $RPM_BUILD_ROOT%{_docdir}/sql.pdf rm $RPM_BUILD_ROOT%{_docdir}/parcat.pdf +rm $RPM_BUILD_ROOT%{_docdir}/parset.pdf %clean rm -rf $RPM_BUILD_ROOT @@ -92,7 +95,7 @@ rm -rf $RPM_BUILD_ROOT /usr/bin/* /usr/share/man/man1/* /usr/share/man/man7/* -%doc README NEWS src/parallel.html src/env_parallel.html src/parallel_tutorial.html src/parallel_design.html src/parallel_alternatives.html src/sem.html src/sql.html src/parcat.html src/niceload.html src/parallel.texi src/env_parallel.texi src/parallel_tutorial.texi src/parallel_design.texi src/parallel_alternatives.texi src/niceload.texi src/sem.texi src/sql.texi src/parcat.texi src/parallel.pdf src/env_parallel.pdf src/parallel_tutorial.pdf src/parallel_design.pdf src/parallel_alternatives.pdf src/niceload.pdf src/sem.pdf src/sql.pdf src/parcat.pdf +%doc README NEWS src/parallel.html src/env_parallel.html src/parallel_tutorial.html src/parallel_design.html src/parallel_alternatives.html src/sem.html src/sql.html src/parcat.html src/parset.html src/niceload.html src/parallel.texi src/env_parallel.texi src/parallel_tutorial.texi src/parallel_design.texi src/parallel_alternatives.texi src/niceload.texi src/sem.texi src/sql.texi src/parcat.texi src/parset.texi src/parallel.pdf src/env_parallel.pdf src/parallel_tutorial.pdf src/parallel_design.pdf src/parallel_alternatives.pdf src/niceload.pdf src/sem.pdf src/sql.pdf src/parcat.pdf src/parset.pdf %changelog * Sat Jan 22 2011 Ole Tange diff --git a/src/niceload b/src/niceload index 08b069f0..dade7ad3 100755 --- a/src/niceload +++ b/src/niceload @@ -24,7 +24,7 @@ use strict; use Getopt::Long; $Global::progname="niceload"; -$Global::version = 20170323; +$Global::version = 20170422; Getopt::Long::Configure("bundling","require_order"); get_options_from_array(\@ARGV) || die_usage(); if($opt::version) { diff --git a/src/parallel b/src/parallel index 605f5928..f1a63f27 100755 --- a/src/parallel +++ b/src/parallel @@ -1363,7 +1363,7 @@ sub check_invalid_option_combinations { sub init_globals { # Defaults: - $Global::version = 20170417; + $Global::version = 20170422; $Global::progname = 'parallel'; $Global::infinity = 2**31; $Global::debug = 0; diff --git a/src/sql b/src/sql index ddefc6f3..c67e6cc9 100755 --- a/src/sql +++ b/src/sql @@ -576,7 +576,7 @@ $Global::Initfile && unlink $Global::Initfile; exit ($err); sub parse_options { - $Global::version = 20170323; + $Global::version = 20170422; $Global::progname = 'sql'; # This must be done first as this may exec myself