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parallel: When hitting EOF: Close file without reading to EOF.
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@ -223,15 +223,19 @@ GNU Parallel 20140822 ('Argentina/Gaza') has been released. It is available for
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Haiku of the month:
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>>>Are you tired of
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inflexible replacements?
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Use Perl expressions.
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-- Ole Tange
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code fork headache blues?
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option P is your new friend
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`man parallel` now!
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-- Malcolm Cook
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New in this release:
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* GNU Parallel now uses the same shell it was started from as the command shell for local jobs. So if GNU Parallel is started from tcsh it will use tcsh as its shell even if the login $SHELL is different. For remote jobs the login $SHELL will be used.
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* GNU Parallel was cited in: A Web Service for Scholarly Big Data Information Extraction http://patshih.ist.psu.edu/publications/Williams-CiteSeerExtractor-ICWS14.pdf
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* --plus adds the replacement strings {+/} {+.} {+..} {+...} {..} {...} {/..} {/...}. The idea being that '+foo' matches the opposite of 'foo' and {} = {+/}/{/} = {.}.{+.} = {+/}/{/.}.{+.} = {..}.{+..} = {+/}/{/..}.{+..} = {...}.{+...} = {+/}/{/...}.{+...}
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* GNU Parallel was covered in the webcast 2014-08-20: Data Science at the Command Line http://www.oreilly.com/pub/e/3115
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* Сборка GNU parallel для CentOS/RHEL http://www.stableit.ru/2014/07/gnu-parallel-centosrhel.html
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12
src/parallel
12
src/parallel
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@ -647,8 +647,8 @@ sub options_hash {
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"arg-file|a=s" => \@opt::a,
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"no-run-if-empty|r" => \$opt::r,
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"replace|i:s" => \$opt::i,
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"E=s" => \$opt::E,
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"eof|e:s" => \$opt::E,
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"E=s" => \$opt::eof,
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"eof|e:s" => \$opt::eof,
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"max-args|n=i" => \$opt::max_args,
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"max-replace-args|N=i" => \$opt::max_replace_args,
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"colsep|col-sep|C=s" => \$opt::colsep,
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@ -818,7 +818,7 @@ sub parse_options {
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my ($shorthand,$long) = split/ /,$_,2;
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$Global::rpl{$shorthand} = $long;
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}
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if(defined $opt::E) { $Global::end_of_file_string = $opt::E; }
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if(defined $opt::eof) { $Global::end_of_file_string = $opt::eof; }
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if(defined $opt::max_args) { $Global::max_number_of_args = $opt::max_args; }
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if(defined $opt::timeout) { $Global::timeoutq = TimeoutQueue->new($opt::timeout); }
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if(defined $opt::tmpdir) { $ENV{'TMPDIR'} = $opt::tmpdir; }
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@ -6902,7 +6902,7 @@ sub empty {
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for my $fh (@{$self->{'fhs'}}) {
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$empty &&= eof($fh);
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}
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::debug("run", "MultifileQueue->empty $empty");
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::debug("run", "MultifileQueue->empty $empty ");
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return $empty;
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}
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@ -7036,8 +7036,8 @@ sub read_arg_from_fh {
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if($Global::end_of_file_string and
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$arg eq $Global::end_of_file_string) {
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# Ignore the rest of input file
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while (<$fh>) {}
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# ::debug("run", "EOF-string $arg\n");
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close $fh;
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::debug("run", "EOF-string ($arg) met\n");
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if(defined $prepend) {
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return Arg->new($prepend);
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} else {
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@ -1012,6 +1012,14 @@ control on the command line (used by GNU B<parallel> internally when
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called with B<--sshlogin>).
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=item B<--plus> (alpha testing)
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Activate additional replacement strings: {+/} {+.} {+..} {+...} {..}
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{...} {/..} {/...}. The idea being that '{+foo}' matches the opposite of
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'{foo}' and {} = {+/}/{/} = {.}.{+.} = {+/}/{/.}.{+.} = {..}.{+..} =
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{+/}/{/..}.{+..} = {...}.{+...} = {+/}/{/...}.{+...}
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=item B<--progress>
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Show progress of computations. List the computers involved in the task
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@ -2862,7 +2870,7 @@ The idea is to put the jobs into a file and have GNU B<parallel> read
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from that continuously. As GNU B<parallel> will stop at end of file we
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use B<tail> to continue reading:
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B<true >>B<jobqueue>; B<tail -f jobqueue | parallel>
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B<true >>B<jobqueue>; B<tail -n+0 -f jobqueue | parallel>
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To submit your jobs to the queue:
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@ -2884,6 +2892,14 @@ E.g. if you have 10 jobslots then the output from the first completed
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job will only be printed when job 11 has started, and the output of
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second completed job will only be printed when job 12 has started.
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To use B<--eof> to make GNU B<parallel> exit, B<tail> also needs to be
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forced to exit:
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tail -n+0 -f command-list.txt |
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(parallel --eof=EXIT {}; echo Parallel is now done;
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(seq 1000 >> command-list.txt &);
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echo Done appending dummy data forcing tail to exit)
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=head1 EXAMPLE: GNU Parallel as dir processor
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