parallel: Removed memleak.

This commit is contained in:
Ole Tange 2016-08-14 16:54:27 +02:00
parent e94774df14
commit fd6abf1f9a
5 changed files with 82 additions and 29 deletions

View file

@ -3502,12 +3502,17 @@ sub reaper {
# @pids_reaped = PIDs of children finished # @pids_reaped = PIDs of children finished
my $stiff; my $stiff;
my @pids_reaped; my @pids_reaped;
my $children_reaped = 0;
debug("run", "Reaper "); debug("run", "Reaper ");
# For efficiency surround with BEGIN/COMMIT when using $opt::sqlmaster # For efficiency surround with BEGIN/COMMIT when using $opt::sqlmaster
$opt::sqlmaster and $Global::sql->run("BEGIN;"); $opt::sqlmaster and $Global::sql->run("BEGIN;");
while (($stiff = waitpid(-1, &WNOHANG)) > 0) { while (($stiff = waitpid(-1, &WNOHANG)) > 0) {
# $stiff = pid of dead process # $stiff = pid of dead process
push(@pids_reaped,$stiff); if(wantarray) {
push(@pids_reaped,$stiff);
} else {
$children_reaped++;
}
if($Global::sshmaster{$stiff}) { if($Global::sshmaster{$stiff}) {
# This is one of the ssh -M: ignore # This is one of the ssh -M: ignore
next; next;
@ -3565,7 +3570,7 @@ sub reaper {
} }
$opt::sqlmaster and $Global::sql->run("COMMIT;"); $opt::sqlmaster and $Global::sql->run("COMMIT;");
debug("run", "done "); debug("run", "done ");
return @pids_reaped; return wantarray ? @pids_reaped : $children_reaped;
} }
sub __USAGE__ {} sub __USAGE__ {}
@ -5313,18 +5318,20 @@ sub compute_number_of_processes {
if($system_limit < $wanted_processes) { if($system_limit < $wanted_processes) {
# The system_limit is less than the wanted_processes # The system_limit is less than the wanted_processes
if($system_limit < 1 and not $Global::JobQueue->empty()) { if($system_limit < 1 and not $Global::JobQueue->empty()) {
::warning("Cannot spawn any jobs. Raising ulimit -u or /etc/security/limits.conf", ::warning("Cannot spawn any jobs. ".
"Raising ulimit -u or /etc/security/limits.conf",
"or /proc/sys/kernel/pid_max may help."); "or /proc/sys/kernel/pid_max may help.");
::wait_and_exit(255); ::wait_and_exit(255);
} }
if(not $more_filehandles) { if(not $more_filehandles) {
::warning("Only enough file handles to run ". $system_limit. " jobs in parallel.", ::warning("Only enough file handles to run ".
"Running 'parallel -j0 -N $system_limit --pipe parallel -j0' or ", $system_limit. " jobs in parallel.",
"Running 'parallel -j0 -N $system_limit --pipe parallel -j0' or",
"raising ulimit -n or /etc/security/limits.conf may help."); "raising ulimit -n or /etc/security/limits.conf may help.");
} }
if($max_system_proc_reached) { if($max_system_proc_reached) {
::warning("Only enough available processes to run ". $system_limit. ::warning("Only enough available processes to run ".
" jobs in parallel.", $system_limit. " jobs in parallel.",
"Raising ulimit -u or /etc/security/limits.conf ", "Raising ulimit -u or /etc/security/limits.conf ",
"or /proc/sys/kernel/pid_max may help."); "or /proc/sys/kernel/pid_max may help.");
} }
@ -8484,25 +8491,21 @@ sub set_seq {
$self->{'seq'} = shift; $self->{'seq'} = shift;
} }
{ sub slot {
my $max_slot_number; # Find the number of a free job slot and return it
# Uses:
sub slot { # @Global::slots - list with free jobslots
# Find the number of a free job slot and return it # Returns:
# Uses: # $jobslot = number of jobslot
# @Global::slots - list with free jobslots my $self = shift;
# Returns: if(not $self->{'slot'}) {
# $jobslot = number of jobslot if(not @Global::slots) {
my $self = shift; # $max_slot_number will typically be $Global::max_jobs_running
if(not $self->{'slot'}) { push @Global::slots, ++$Global::max_slot_number;
if(not @Global::slots) {
# $max_slot_number will typically be $Global::max_jobs_running
push @Global::slots, ++$Global::max_slot_number;
}
$self->{'slot'} = shift @Global::slots;
} }
return $self->{'slot'}; $self->{'slot'} = shift @Global::slots;
} }
return $self->{'slot'};
} }
sub populate { sub populate {
@ -10622,4 +10625,5 @@ sub unlock {
# Keep perl -w happy # Keep perl -w happy
$opt::x = $Semaphore::timeout = $Semaphore::wait = $opt::x = $Semaphore::timeout = $Semaphore::wait =
$Job::file_descriptor_warning_printed = $Global::envdef = @Arg::arg; $Job::file_descriptor_warning_printed = $Global::envdef = @Arg::arg =
$Global::max_slot_number;

View file

@ -28,5 +28,51 @@ par_over_4GB() {
nice md5sum nice md5sum
} }
measure() {
# Input:
# $1 = iterations
# $2 = sleep 1 sec for every $2
seq $1 |
stdout time -v parallel -u sleep '{= $_=$_%'$2'?0:1 =}' |
grep Maximum | field 6;
}
export -f measure
no_mem_leak() {
# Return false if leaking
max1000=$(parallel measure {} 100000 ::: 1000 1000 1000 1000 |
sort -n | tail -n 1)
min30000=$(parallel measure {} 100000 ::: 30000 30000 30000 30000 |
sort -n | head -n 1)
if [ $max1000 -gt $min30000 ] ; then
max1000=$(parallel measure {} 100 ::: 1000 1000 1000 1000 |
sort -n | tail -n 1)
min30000=$(parallel measure {} 100 ::: 30000 30000 30000 30000 |
sort -n | head -n 1)
if [ $max1000 -gt $min30000 ] ; then
echo $max1000 -gt $min30000 = no leak
return 0
else
echo not $max1000 -gt $min30000 = possible leak
return 1
fi
else
echo not $max1000 -gt $min30000 = possible leak
return 1
fi
}
export -f no_mem_leak
par_mem_leak() {
echo "### test for mem leak"
if no_mem_leak >/dev/null ; then
echo no mem leak detected
else
echo possible mem leak;
fi
}
export -f $(compgen -A function | grep par_) export -f $(compgen -A function | grep par_)
compgen -A function | grep par_ | sort | parallel -vj0 -k --tag --joblog /tmp/jl-`basename $0` '{} 2>&1' compgen -A function | grep par_ | sort | parallel -vj0 -k --tag --joblog /tmp/jl-`basename $0` '{} 2>&1'

View file

@ -1,7 +1,10 @@
par_mem_leak 2>&1
par_mem_leak ### test for mem leak
par_mem_leak no mem leak detected
par_outside_file_handle_limit 2>&1 par_outside_file_handle_limit 2>&1
par_outside_file_handle_limit ### Test Force outside the file handle limit, 2009-02-17 Gave fork error par_outside_file_handle_limit ### Test Force outside the file handle limit, 2009-02-17 Gave fork error
par_outside_file_handle_limit parallel: Warning: Only enough file handles to run 252 jobs in parallel. par_outside_file_handle_limit parallel: Warning: Only enough file handles to run 251 jobs in parallel.
par_outside_file_handle_limit parallel: Warning: Running 'parallel -j0 -N 252 --pipe parallel -j0' or par_outside_file_handle_limit parallel: Warning: Running 'parallel -j0 -N 251 --pipe parallel -j0' or
par_outside_file_handle_limit parallel: Warning: raising ulimit -n or /etc/security/limits.conf may help. par_outside_file_handle_limit parallel: Warning: raising ulimit -n or /etc/security/limits.conf may help.
par_outside_file_handle_limit Start par_outside_file_handle_limit Start
par_outside_file_handle_limit end par_outside_file_handle_limit end

View file

@ -1,7 +1,7 @@
echo '### bug #46214: Using --pipepart doesnt spawn multiple jobs in version 20150922' echo '### bug #46214: Using --pipepart doesnt spawn multiple jobs in version 20150922'
### bug #46214: Using --pipepart doesnt spawn multiple jobs in version 20150922 ### bug #46214: Using --pipepart doesnt spawn multiple jobs in version 20150922
seq 1000000 > /tmp/num1000000; stdout parallel --pipepart --progress -a /tmp/num1000000 --block 10k -j0 true |grep 1:local seq 1000000 > /tmp/num1000000; stdout parallel --pipepart --progress -a /tmp/num1000000 --block 10k -j0 true |grep 1:local
1:local / 8 / 252 1:local / 8 / 251
echo '**' echo '**'
** **
testhalt() { echo '### testhalt --halt '$1; (yes 0 | head -n 10; seq 10) | stdout parallel -kj4 --halt $1 'sleep {= $_=$_*0.3+1 =}; exit {}'; echo $?; (seq 10; yes 0 | head -n 10) | stdout parallel -kj4 --halt $1 'sleep {= $_=$_*0.3+1 =}; exit {}'; echo $?; }; export -f testhalt; parallel -kj0 testhalt ::: now,fail=0 now,fail=1 now,fail=2 now,fail=30% now,fail=70% soon,fail=0 soon,fail=1 soon,fail=2 soon,fail=30% soon,fail=70% now,success=0 now,success=1 now,success=2 now,success=30% now,success=70% soon,success=0 soon,success=1 soon,success=2 soon,success=30% now,success=70% testhalt() { echo '### testhalt --halt '$1; (yes 0 | head -n 10; seq 10) | stdout parallel -kj4 --halt $1 'sleep {= $_=$_*0.3+1 =}; exit {}'; echo $?; (seq 10; yes 0 | head -n 10) | stdout parallel -kj4 --halt $1 'sleep {= $_=$_*0.3+1 =}; exit {}'; echo $?; }; export -f testhalt; parallel -kj0 testhalt ::: now,fail=0 now,fail=1 now,fail=2 now,fail=30% now,fail=70% soon,fail=0 soon,fail=1 soon,fail=2 soon,fail=30% soon,fail=70% now,success=0 now,success=1 now,success=2 now,success=30% now,success=70% soon,success=0 soon,success=1 soon,success=2 soon,success=30% now,success=70%