#!/usr/bin/env bash # This file must be sourced in bash: # # source `which env_parallel.bash` # # after which 'env_parallel' works # # # Copyright (C) 2016,2017 # Ole Tange and Free Software Foundation, Inc. # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 3 of the License, or # (at your option) any later version. # # This program is distributed in the hope that it will be useful, but # WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU # General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program; if not, see # or write to the Free Software Foundation, Inc., 51 Franklin St, # Fifth Floor, Boston, MA 02110-1301 USA env_parallel() { # env_parallel.bash _names_of_ALIASES() { compgen -a } _bodies_of_ALIASES() { alias "$@" } _names_of_FUNCTIONS() { compgen -A function } _bodies_of_FUNCTIONS() { typeset -f "$@" } _names_of_VARIABLES() { compgen -A variable } _bodies_of_VARIABLES() { typeset -p "$@" } _remove_bad_NAMES() { # Do not transfer vars and funcs from env_parallel grep -Ev '^(_names_of_ALIASES|_bodies_of_ALIASES|_names_of_maybe_FUNCTIONS|_names_of_FUNCTIONS|_bodies_of_FUNCTIONS|_names_of_VARIABLES|_bodies_of_VARIABLES|_remove_bad_NAMES|_prefix_PARALLEL_ENV|_get_ignored_VARS|_make_grep_REGEXP|_ignore_UNDERSCORE|_alias_NAMES|_list_alias_BODIES|_function_NAMES|_list_function_BODIES|_variable_NAMES|_list_variable_VALUES|_prefix_PARALLEL_ENV|PARALLEL_TMP)$' | # Filter names matching --env grep -E "^$_grep_REGEXP"\$ | grep -vE "^$_ignore_UNDERSCORE"\$ | grep -vFf <(readonly) | grep -Ev '^(BASHOPTS|BASHPID|EUID|GROUPS|FUNCNAME|DIRSTACK|_|PIPESTATUS|PPID|SHELLOPTS|UID|USERNAME|BASH_[A-Z_]+)$' } _prefix_PARALLEL_ENV() { shopt 2>/dev/null | perl -pe 's:\s+off:;: and s/^/shopt -u /; s:\s+on:;: and s/^/shopt -s /; s:;$:&>/dev/null;:'; echo 'shopt -s expand_aliases &>/dev/null'; } _get_ignored_VARS() { perl -e ' for(@ARGV){ $next_is_env and push @envvar, split/,/, $_; $next_is_env=/^--env$/; } if(grep { /^_$/ } @envvar) { if(not open(IN, "<", "$ENV{HOME}/.parallel/ignored_vars")) { print STDERR "parallel: Error: ", "Run \"parallel --record-env\" in a clean environment first.\n"; } else { chomp(@ignored_vars = ); $vars = join "|",map { quotemeta $_ } "env_parallel", @ignored_vars; print $vars ? "($vars)" : "(,,nO,,VaRs,,)"; } } ' -- "$@" } # Get the --env variables if set # --env _ should be ignored # and convert a b c to (a|b|c) # If --env not set: Match everything (.*) _make_grep_REGEXP() { perl -e ' for(@ARGV){ /^_$/ and $next_is_env = 0; $next_is_env and push @envvar, split/,/, $_; $next_is_env = /^--env$/; } $vars = join "|",map { quotemeta $_ } @envvar; print $vars ? "($vars)" : "(.*)"; ' -- "$@" } if which parallel | grep 'no parallel in' >/dev/null; then echo 'env_parallel: Error: parallel must be in $PATH.' >&2 return 1 fi if which parallel >/dev/null; then true which on linux else echo 'env_parallel: Error: parallel must be in $PATH.' >&2 return 1 fi # Grep regexp for vars given by --env _grep_REGEXP="`_make_grep_REGEXP \"$@\"`" # Deal with --env _ _ignore_UNDERSCORE="`_get_ignored_VARS \"$@\"`" # --record-env if perl -e 'exit grep { /^--record-env$/ } @ARGV' -- "$@"; then true skip else (_names_of_ALIASES; _names_of_FUNCTIONS; _names_of_VARIABLES) | cat > $HOME/.parallel/ignored_vars return 0 fi # Grep alias names _alias_NAMES="`_names_of_ALIASES | _remove_bad_NAMES`" _list_alias_BODIES="_bodies_of_ALIASES $_alias_NAMES" if [ "$_alias_NAMES" = "" ] ; then # no aliases selected _list_alias_BODIES="true" fi unset _alias_NAMES # Grep function names _function_NAMES="`_names_of_FUNCTIONS | _remove_bad_NAMES`" _list_function_BODIES="_bodies_of_FUNCTIONS $_function_NAMES" if [ "$_function_NAMES" = "" ] ; then # no functions selected _list_function_BODIES="true" fi unset _function_NAMES # Grep variable names _variable_NAMES="`_names_of_VARIABLES | _remove_bad_NAMES`" _list_variable_VALUES="_bodies_of_VARIABLES $_variable_NAMES" if [ "$_variable_NAMES" = "" ] ; then # no variables selected _list_variable_VALUES="true" fi unset _variable_NAMES # Copy shopt (so e.g. extended globbing works) # But force expand_aliases as aliases otherwise do not work PARALLEL_ENV="` _prefix_PARALLEL_ENV $_list_alias_BODIES; $_list_function_BODIES; $_list_variable_VALUES; `" export PARALLEL_ENV unset _list_alias_BODIES unset _list_variable_VALUES unset _list_function_BODIES `which parallel` "$@"; _parallel_exit_CODE=$? unset PARALLEL_ENV; return $_parallel_exit_CODE } _parset() { # $1 = variable NAME # If ${"$1"} is an array: Then put the output into variables with those names # else put the output into an array named ${"$1"} # e.g.: # # Create array named myvar # parset myvar echo ::: {1..10} # echo ${myvar[5]} # # # Put output into $var_a $var_b $var_c # varnames=(var_a var_b var_c) # parset -a varnames echo ::: {1..3} # echo $var_c # # # Put output into $var_a2 $var_b2 $var_c2 # varname=var_a2,var_b2,var_c2 # parset -a varname echo ::: {1..3} # echo $var_c2 # # # Put output into $var_a3 $var_b3 $var_c3 # varname="var_a3 var_b3 var_c3" # parset -a varname echo ::: {1..3} # echo $var_c3 # Variable name to store in local _parset_vname local _parset_vnames # Array to fetch names from local _parset_aname _parset_vname="$1" _parset_aname="_nO_sUch_vAr" shift if [[ "-a" == "$_parset_vname" ]] ; then # Option -a given echo '-a given' _parset_vname="$1" _parset_aname="$1" shift if [[ "$(declare -p $_parset_vname 2>/dev/null)" =~ "declare -a" ]]; then # OK true else # error echo "$_parset_vname" must be an array return 1 fi else local _parset_splitable _parset_splitable="$(eval echo '$'$_parset_vname)" if echo "$_parset_splitable" | grep -E ',| ' >/dev/null ; then # Split on , and space _parset_vnames=( $(perl -e 'print map { s/,| /\n/g; $_ } @ARGV' "$_parset_splitable" ) ) _parset_aname="_parset_vnames" echo first ${_parset_vnames[0]} else # _parset_vname should be used as an array true fi fi if [[ "$(declare -p $_parset_aname 2>/dev/null)" =~ "declare -a" ]]; then # vname refers to an array # The array elements refers to variable names to put output into eval $( parallel --files "$@" | perl -pe 'chop;$_="\"\`cat $_; rm $_\`\"\n"' | parallel echo {2}={1} :::: - :::+ $(eval echo '${'$_parset_aname'[@]}') ) unset _parset_aname else # Put output into array ${$_parset_vname} eval $_parset_vname="( $( parallel --files "$@" | perl -pe 'chop;$_="\"\`cat $_; rm $_\`\" "' ) )" fi } parset() { # If $1 contains ',' or space: # Split on , to get the destination variable names # If $1 is a single destination variable name: # Treat it as the name of an array # # # Create array named myvar # parset myvar echo ::: {1..10} # echo ${myvar[5]} # # # Put output into $var_a $var_b $var_c # varnames=(var_a var_b var_c) # parset "${varnames[*]}" echo ::: {1..3} # echo $var_c # # # Put output into $var_a4 $var_b4 $var_c4 # parset "var_a4 var_b4 var_c4" echo ::: {1..3} # echo $var_c4 _parset_name="$1" shift if echo "$_parset_name" | grep -E ',| ' >/dev/null ; then # $1 contains , or space # Split on , or space to get the names eval "$( # Compute results into files parallel --files "$@" | # var1=`cat tmpfile1; rm tmpfile1` # var2=`cat tmpfile2; rm tmpfile2` parallel -q echo {2}='`cat {1}; rm {1}`' :::: - :::+ $( echo "$_parset_name" | perl -pe 's/,/ /g' ) )" else # $1 contains no space or , # => $1 is the name of the array to put data into eval $_parset_name="( $( parallel --files "$@" | perl -pe 'chop;$_="\"\`cat $_; rm $_\`\" "' ) )" fi }