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README |
GNU Parallel https://www.gnu.org/software/parallel/ = Presentation of GNU Parallel = GNU Parallel is a shell tool for executing jobs in parallel using one or more computers. A job can be a single command or a small script that has to be run for each of the lines in the input. The typical input is a list of files, a list of hosts, a list of users, a list of URLs, or a list of tables. A job can also be a command that reads from a pipe. GNU Parallel can then split the input and pipe it into commands in parallel. If you use xargs and tee today you will find GNU Parallel very easy to use as GNU Parallel is written to have the same options as xargs. If you write loops in shell, you will find GNU Parallel may be able to replace most of the loops and make them run faster by running several jobs in parallel. GNU Parallel makes sure output from the commands is the same output as you would get had you run the commands sequentially. This makes it possible to use output from GNU Parallel as input for other programs. See the cheat sheet for examples that cover most of the daily usage: www.gnu.org/s/parallel/parallel_cheat.pdf = 10 seconds installation = For security reasons it is recommended you use your package manager to install. But if you cannot do that then you can use this 10 seconds installation. The 10 seconds installation will try to do a full installation; if that fails, a personal installation; if that fails, a minimal installation. $ (wget -O - pi.dk/3 || lynx -source pi.dk/3 || curl pi.dk/3/ || \ fetch -o - http://pi.dk/3 ) > install.sh $ sha1sum install.sh | grep 51621b7f1ee103c00783aae4ef9889f8 12345678 51621b7f 1ee103c0 0783aae4 ef9889f8 $ md5sum install.sh | grep 62eada78703b5500241b8e50baf62758 62eada78 703b5500 241b8e50 baf62758 $ sha512sum install.sh | grep c0206a65dc86f2bb6bbdf1a2bc96bc6d067 160d3159 9480cf5c a101512f 150b7ac0 206a65dc 86f2bb6b bdf1a2bc 96bc6d06 7f8237c2 0964b67f bccf8a93 332528fa 11e5ab43 2a6226a6 ceb197ab 7f03c061 $ bash install.sh This will literally install faster than reading the rest of this document. = Full installation = Full installation of GNU Parallel is as simple as: wget https://ftpmirror.gnu.org/parallel/parallel-20240422.tar.bz2 wget https://ftpmirror.gnu.org/parallel/parallel-20240422.tar.bz2.sig gpg parallel-20240422.tar.bz2.sig bzip2 -dc parallel-20240422.tar.bz2 | tar xvf - cd parallel-20240422 ./configure && make && sudo make install = Personal installation = If you are not root you can add ~/bin to your path and install in ~/bin and ~/share: wget https://ftpmirror.gnu.org/parallel/parallel-20240422.tar.bz2 wget https://ftpmirror.gnu.org/parallel/parallel-20240422.tar.bz2.sig gpg parallel-20240422.tar.bz2.sig bzip2 -dc parallel-20240422.tar.bz2 | tar xvf - cd parallel-20240422 ./configure --prefix=$HOME && make && make install Or if your system lacks 'make' you can simply copy src/parallel src/sem src/niceload src/sql to a dir in your path. = Minimal installation = If you just need parallel and do not have 'make' installed (maybe the system is old or Microsoft Windows): wget https://git.savannah.gnu.org/cgit/parallel.git/plain/src/parallel chmod 755 parallel cp parallel sem mv parallel sem dir-in-your-$PATH/bin/ = Installation on compute servers = If you are developing your script to run on a remote server, that does not have GNU Parallel installed, but you have it installed on you development machine, then you can use `parallel --embed`. parallel --embed > newscript.sh Just edit the last lines of newscript.sh and copy it to the compute server. = Test the installation = After this you should be able to do: parallel -j0 ping -nc 3 ::: qubes-os.org gnu.org freenetproject.org This will send 3 ping packets to 3 different hosts in parallel and print the output when they complete. Watch the intro video for a quick introduction: https://www.youtube.com/playlist?list=PL284C9FF2488BC6D1 Walk through the tutorial (man parallel_tutorial). You command line will love you for it. When using programs that use GNU Parallel to process data for publication please cite: Tange, O. (2024, April 22). GNU Parallel 20240422 ('Børsen'). Zenodo. https://doi.org/10.5281/zenodo.11043435 Copyright (C) 2007-2022 Ole Tange, http://ole.tange.dk and Free Software Foundation, Inc. = New versions = New versions will be released at: https://ftp.gnu.org/gnu/parallel/ = Dependencies = GNU Parallel should work with a normal full Perl installation. However, if you system has split up Perl into multiple packages then these are the important ones: opkg install perlbase-getopt perlbase-ipc procps-ng-ps perlbase-mime SPDX-FileCopyrightText: 2021-2022 Ole Tange, http://ole.tange.dk and Free Software and Foundation, Inc. SPDX-License-Identifier: GPL-3.0-or-later